Pre_GI Gene

Host: NC_017249:7917586 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:7917586 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
79175867918191606hypothetical proteinBLASTP
791831179196091299hypothetical proteinBLASTP
7919767791984175tRNA-ValQuickGO ontology
792013979211731035hypothetical proteinBLASTP
79211707921550381hypothetical proteinBLASTP
79216027922600999hypothetical proteinBLASTP
79226457923088444hypothetical proteinBLASTP
79231077923403297hypothetical proteinBLASTP
79240497924279231hypothetical proteinBLASTP
79243327924493162hypothetical proteinBLASTP
792452779257231197hypothetical proteinBLASTP
79260937926326234hypothetical proteinBLASTP
792676579284471683two-component hybrid sensor and regulatorQuickGO ontologyBLASTP
792843479299541521hypothetical proteinBLASTP
793016579321591995two-component hybrid sensor and regulatorQuickGO ontologyBLASTP
79322657932450186hypothetical proteinBLASTP
79326677933611945malonic semialdehyde oxidative decarboxylaseQuickGO ontologyBLASTP
79336587934128471hypothetical proteinBLASTP
79341637935053891hypothetical proteinBLASTP
793509979368981800hypothetical proteinBLASTP
793698879380131026hypothetical proteinBLASTP
793820779392171011transketolaseQuickGO ontologyBLASTP
79392147940065852transketolase alpha subunit proteinQuickGO ontologyBLASTP
79400907940854765oxidoreductaseQuickGO ontologyBLASTP
79409487941844897transcriptional regulatorQuickGO ontologyBLASTP
79425167942719204hypothetical protein
79431467943448303hypothetical protein
794445279456571206transposaseQuickGO ontologyBLASTP
79458897946038150hypothetical proteinBLASTP
79461207946371252hypothetical protein
794649079477071218hypothetical proteinBLASTP
79479737948221249hypothetical proteinBLASTP
79487287949024297hypothetical protein
79492187949448231hypothetical protein
79497707950306537hypothetical protein
79509627951186225hypothetical proteinBLASTP
79512197951428210hypothetical proteinBLASTP
79514487952350903hypothetical protein
795233779538961560hypothetical proteinBLASTP
795403979550461008farnesyl diphosphate synthaseQuickGO ontologyBLASTP
795519279565351344cytochrome P-450 BJ-4QuickGO ontologyBLASTP
79565357957380846dehydrogenaseQuickGO ontologyBLASTP
79573857957675291hypothetical protein
795767779589661290cytochrome P-450 BJ-3QuickGO ontologyBLASTP
795906179602661206cytochrome P-450 BJ-1QuickGO ontologyBLASTP
79602837960588306hypothetical proteinBLASTP
79608117961248438hypothetical proteinBLASTP
79613607961896537hypothetical protein
79618397962654816hypothetical proteinBLASTP
79630537963466414transposaseQuickGO ontologyBLASTP
796367779648971221hypothetical proteinBLASTP
79648977965517621integraserecombinase proteinQuickGO ontologyBLASTP
796644679675791134aminotransferaseQuickGO ontologyBLASTP
796759979691761578hypothetical proteinBLASTP
79691787969507330hypothetical proteinBLASTP
79695327970311780hypothetical proteinBLASTP
797027779715811305hypothetical proteinBLASTP
797157879730801503hypothetical proteinBLASTP
79732497973452204hypothetical protein
79735167973836321hypothetical proteinBLASTP
79739467974182237hypothetical proteinBLASTP
79746227975125504hypothetical proteinBLASTP
79753617975645285hypothetical proteinBLASTP
79756307976214585hypothetical proteinBLASTP
79765087977425918hypothetical proteinBLASTP
79783377979092756hypothetical proteinBLASTP
79791167979682567hypothetical proteinBLASTP
79798407980010171hypothetical protein
79803857980669285hypothetical proteinBLASTP
79813837981790408hypothetical proteinBLASTP
79819267982132207cold shock proteinQuickGO ontologyBLASTP
79824277982957531hypothetical proteinBLASTP
79830037983572570hypothetical proteinBLASTP
798368679850261341hypothetical proteinBLASTP
798505879869741917hypothetical proteinBLASTP
79869817987529549hypothetical protein
798767379887971125hypothetical proteinBLASTP
79888107989130321hypothetical proteinBLASTP
79891277989501375hypothetical proteinBLASTP
79899267990156231hypothetical proteinBLASTP
79902977990569273hypothetical proteinBLASTP