Pre_GI Gene

Host: NC_017249:8221992 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:8221992 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
822199282234881497RNA polymerase sigma-54 subunitQuickGO ontologyBLASTP
82239118224345435hypothetical proteinBLASTP
82246068224935330hypothetical proteinBLASTP
82257408226213474transcriptional regulatorQuickGO ontologyBLASTP
82276268228240615hypothetical proteinBLASTP
822964782309751329hypothetical proteinBLASTP
82309918231554564hypothetical proteinBLASTP
82316608232076417hypothetical proteinBLASTP
82328168233268453transposaseQuickGO ontologyBLASTP
82331848233576393transposaseQuickGO ontologyBLASTP
823413682357671632hypothetical proteinBLASTP
82367228236910189hypothetical protein
82379248238499576hypothetical proteinBLASTP
82395948239905312hypothetical proteinBLASTP
82401128240684573hypothetical proteinBLASTP
82404058241091687hypothetical proteinBLASTP
82411118241485375hypothetical proteinBLASTP
824181282431581347citrate-proton symporterQuickGO ontologyBLASTP
82438558244418564transposaseQuickGO ontologyBLASTP
82444188244618201hypothetical proteinBLASTP
82447708245276507hypothetical proteinBLASTP
82454238245806384hypothetical proteinBLASTP
82460408246312273hypothetical proteinBLASTP
82463908246683294transposaseQuickGO ontologyBLASTP
824682682478361011transposaseQuickGO ontologyBLASTP
824816782500831917hypothetical proteinBLASTP
82508378251817981cytochrome P450 family proteinQuickGO ontologyBLASTP
82526298253510882hypothetical proteinBLASTP
825369582551761482hypothetical proteinBLASTP
82551548255474321hypothetical proteinBLASTP
82559048256056153hypothetical proteinBLASTP
82565838257491909hypothetical proteinBLASTP
82579548258388435hypothetical proteinBLASTP
82590748260054981hypothetical proteinBLASTP
82612558261431177hypothetical proteinBLASTP
82616488262028381hypothetical proteinBLASTP
82620688262757690two-component response regulatorQuickGO ontologyBLASTP
826278482642381455RhcC2 proteinQuickGO ontologyBLASTP
82642498264911663hypothetical proteinBLASTP
826510782674222316hypothetical proteinBLASTP
826771582690971383hypothetical proteinBLASTP
82700958270577483hypothetical protein
82706318271341711transposaseQuickGO ontologyBLASTP
827134782727051359transposaseQuickGO ontologyBLASTP
82728098273651843hypothetical proteinBLASTP
827335282746861335transposaseQuickGO ontologyBLASTP