Pre_GI Gene

Host: NC_017269:303500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017269:303500 Vibrio cholerae LMA3984-4 chromosome II, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
303540303839300Plasmid stabilization element ParE putativeQuickGO ontologyBLASTP
303836304078243transcriptional regulatorQuickGO ontologyBLASTP
304115304276162hypothetical proteinBLASTP
304591304743153hypothetical proteinBLASTP
305178305714537hypothetical proteinBLASTP
305892306026135hypothetical proteinBLASTP
306011306175165hypothetical proteinBLASTP
306386306811426acetyltransferase putativeQuickGO ontologyBLASTP
308795308920126hypothetical proteinBLASTP
310264310440177hypothetical proteinBLASTP
310762310965204hypothetical proteinBLASTP
311841312107267hypothetical proteinBLASTP
312369312773405hypothetical proteinBLASTP
313548313862315hypothetical proteinBLASTP
314081314470390Lactoylglutathione lyaseQuickGO ontologyBLASTP
314690315331642Sulfate-binding protein SbpQuickGO ontologyBLASTP
316223316336114hypothetical protein
316345316506162hypothetical proteinBLASTP
318295318534240cytotoxic translational repressor of toxin- antitoxin stability systemQuickGO ontologyBLASTP
318521318835315hypothetical proteinBLASTP
318990319406417acetyltransferaseQuickGO ontologyBLASTP
319499319747249acetyltransferaseQuickGO ontologyBLASTP
319999320250252StbD replicon stabilization protein antitoxin to StbEQuickGO ontologyBLASTP
321064321435372MazG-like proteinQuickGO ontologyBLASTP
321658321927270hypothetical proteinBLASTP
322329322457129acetyltransferaseQuickGO ontologyBLASTP
322801322917117prevent host death protein Phd antitoxinQuickGO ontologyBLASTP
322905323207303Death on curing protein Doc toxinQuickGO ontologyBLASTP
3233463243591014Lipase GDXG familyQuickGO ontologyBLASTP
325369325806438IS1004 transposaseQuickGO ontologyBLASTP
325968326087120acetyltransferase putativeQuickGO ontologyBLASTP
326262327134873hypothetical proteinBLASTP
328075328344270hypothetical proteinBLASTP
328338328859522hypothetical proteinBLASTP
328991329140150hypothetical proteinBLASTP
329158329283126hypothetical proteinBLASTP
329804329929126hypothetical proteinBLASTP
329994330278285DNA-damage-inducible protein JQuickGO ontologyBLASTP
330472330987516acetyltransferaseQuickGO ontologyBLASTP