Pre_GI Gene

Host: NC_017271:1517820 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017271:1517820 Xanthomonas campestris pv. raphani 756C chromosome, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15178201518299480type III secretion protein HrpB7QuickGO ontologyBLASTP
15182961519126831type III secretion protein HrcTQuickGO ontologyBLASTP
151934815211201773type III secretion outer membrane pore HrcCQuickGO ontologyBLASTP
15211991521564366harpin-like protein Hpa1 XopAQuickGO ontologyBLASTP
15215821521809228hypothetical protein
15220981522514417lysozyme-related protein Hpa2QuickGO ontologyBLASTP
15225921522753162hypothetical proteinBLASTP
15227501523283534hypothetical proteinBLASTP
152379215249041113hypothetical proteinBLASTP
15255471525747201transposaseQuickGO ontologyBLASTP
15260571526974918type III effector protein XopAL1QuickGO ontologyBLASTP
152761315298142202type III effector protein XopPQuickGO ontologyBLASTP
15298991530879981transposaseQuickGO ontologyBLASTP
15311141532094981transposaseQuickGO ontologyBLASTP
15320851532732648hypothetical proteinBLASTP
15327191533063345cysteine-rich domain-iron-sulfur cluster-binding domain protein putativeQuickGO ontology
15334971534441945beta-glucosidaseQuickGO ontologyBLASTP
153471115366391929F5-8 type C domain proteinQuickGO ontologyBLASTP
15368421536958117hypothetical protein
153719415397612568beta-galactosidaseQuickGO ontologyBLASTP
153975815409661209arabinogalactan endo-14-beta-galactosidaseQuickGO ontologyBLASTP