Pre_GI Gene

Host: NC_017271:2935643 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017271:2935643 Xanthomonas campestris pv. raphani 756C chromosome, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
293564329377212079alpha-glucosidaseQuickGO ontologyBLASTP
29377402937880141hypothetical protein
29379292938081153hypothetical protein
293808029408062727TonB-dependent receptorQuickGO ontologyBLASTP
29411322941251120hypothetical protein
29415812942561981transposaseQuickGO ontologyBLASTP
29427202943124405IS4 family transposaseQuickGO ontologyBLASTP
29431382943524387putative transposaseQuickGO ontologyBLASTP
294373229453481617oligo-16-glucosidaseQuickGO ontologyBLASTP
29454712945608138hypothetical protein
29456942945957264transposaseQuickGO ontologyBLASTP
29459512946796846transposaseQuickGO ontologyBLASTP
29476332948379747VirB6 proteinQuickGO ontologyBLASTP
29500102950840831VirB6 proteinQuickGO ontologyBLASTP
29518932952036144hypothetical protein
29531202953965846transposaseQuickGO ontologyBLASTP
29539592954222264transposaseQuickGO ontologyBLASTP
29561032956456354VirB6 proteinQuickGO ontologyBLASTP
29579732958542570VirB6 proteinQuickGO ontologyBLASTP
29585642958689126VirB6 proteinQuickGO ontologyBLASTP
29594302960071642VirB6 proteinQuickGO ontologyBLASTP
29607392961317579VirB6 proteinQuickGO ontologyBLASTP
296202929631681140type IV secretion system protein VirB6QuickGO ontologyBLASTP
29632332963445213hypothetical protein
29637792964006228hypothetical protein
296411029665512442VirB4 proteinQuickGO ontologyBLASTP
29666322966814183VirB3 proteinQuickGO ontologyBLASTP
29669332967322390VirB2 proteinQuickGO ontologyBLASTP
29673932968319927VirB1 proteinQuickGO ontologyBLASTP
296836129693951035P-type DNA transfer ATPase VirB11QuickGO ontologyBLASTP
296940529706671263VirB10 proteinQuickGO ontologyBLASTP
29706642971437774type IV secretion system protein VirB9QuickGO ontologyBLASTP
29714342972357924VirB8 proteinQuickGO ontologyBLASTP
29724232972818396hypothetical proteinBLASTP
29729912973116126hypothetical protein
297319629748631668VirD4 proteinQuickGO ontologyBLASTP
29748972975139243hypothetical proteinBLASTP
297571729777382022excinuclease ABC subunit BQuickGO ontologyBLASTP
297905229827953744PilY1 proteinQuickGO ontologyBLASTP
29844872984672186pre-pilin leader sequenceQuickGO ontologyBLASTP
298559029869751386decarboxylase family proteinQuickGO ontologyBLASTP
298708129903143234Oar proteinQuickGO ontologyBLASTP
29903302990482153hypothetical protein
29910612991660600multiple antibiotic resistance protein MarCQuickGO ontologyBLASTP
29916572992397741short chain dehydrogenaseQuickGO ontologyBLASTP
29923942992714321hypothetical proteinBLASTP
29928362993414579superoxide dismutaseQuickGO ontologyBLASTP
299364729947891143phosphoribosylaminoimidazole carboxylase ATPase subunitQuickGO ontologyBLASTP
29947862995289504phosphoribosylaminoimidazole carboxylase catalytic subunitQuickGO ontologyBLASTP
29953482995617270hypothetical proteinBLASTP
29956262996498873nicotinate-nucleotide pyrophosphorylaseQuickGO ontologyBLASTP
299656129976221062lipoproteinQuickGO ontologyBLASTP
299832830004422115polyribonucleotide nucleotidyltransferaseQuickGO ontologyBLASTP