Pre_GI Gene

Host: NC_017986:5421000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017986:5421000 Pseudomonas putida ND6 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
542209254232851194major facilitator superfamily transporterQuickGO ontologyBLASTP
542346154250471587ABC transporter-like proteinQuickGO ontologyBLASTP
54250805425499420integraseQuickGO ontologyBLASTP
54255035425634132hypothetical protein
54256765426191516OsmC family proteinQuickGO ontologyBLASTP
54271915427784594hypothetical proteinBLASTP
54280405428846807diaminopimelate epimeraseQuickGO ontologyBLASTP
54291285429307180hypothetical protein
54295215430105585hypothetical proteinBLASTP
54301135430412300helix-turn-helix type 11 domain-containing proteinQuickGO ontologyBLASTP
54304055430659255hypothetical proteinBLASTP
54310175431457441hypothetical proteinBLASTP
54315325431801270hypothetical protein
54320745432766693hypothetical proteinBLASTP
543286054342301371response regulator receiver proteinQuickGO ontologyBLASTP
54344285435426999cytochrome-c peroxidaseQuickGO ontologyBLASTP
543542954372371809integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
543723454386371404response regulator receiver sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
54387125439188477GCN5-like N-acetyltransferaseQuickGO ontologyBLASTP
54394005440101702hypothetical proteinBLASTP
54401715441136966ApbE family lipoproteinQuickGO ontologyBLASTP
544112654433062181oxidoreductase FADNAD-binding subunitQuickGO ontologyBLASTP