Pre_GI Gene

Host: NC_017986:5833819 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017986:5833819 Pseudomonas putida ND6 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
58338195834724906LysR family transcriptional regulatorQuickGO ontologyBLASTP
58347445835139396ArsR family transcriptional regulatorQuickGO ontologyBLASTP
58351425836062921NahRQuickGO ontologyBLASTP
58360795836951873catBC operon regulatorQuickGO ontologyBLASTP
58369665837097132hypothetical protein
583708758382201134CatBQuickGO ontologyBLASTP
58382445838534291CatCQuickGO ontologyBLASTP
58385845839519936CatAQuickGO ontologyBLASTP
58396595840345687hypothetical protein
58403645840531168hypothetical protein
58409955841285291hypothetical proteinBLASTP
584133858426571320site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
58427525843708957putative phage integraseQuickGO ontologyBLASTP
58437575843885129hypothetical protein
58443555844504150hypothetical protein
584451158462291719integrase catalytic subunitQuickGO ontologyBLASTP
58462835846864582putative TniB-like transposition proteinQuickGO ontologyBLASTP
58469765847092117hypothetical protein
58471265847236111hypothetical protein
58474315848150720hypothetical protein
58482415848717477phage integraseQuickGO ontologyBLASTP
58487145849346633phage integraseQuickGO ontologyBLASTP
58495265849642117hypothetical protein
584968158509491269acetyl-CoA hydrolasetransferaseQuickGO ontologyBLASTP
58510135851291279methylmuconolactone isomerase MmlJQuickGO ontologyBLASTP
585132558526111287putative MFS superfamily 4-methylmuconolactone transporterQuickGO ontologyBLASTP
58526675853527861putative acyl-CoA thioesterase IIQuickGO ontologyBLASTP
585352458542467234-methyl-3-oxoadipate CoA-transferase beta-subunitQuickGO ontologyBLASTP
585424358549326904-methyl-3-oxoadipate CoA-transferase alpha-subunitQuickGO ontologyBLASTP
58551855856108924putative LysR family transcriptional regulatorQuickGO ontologyBLASTP
58562025857092891hypothetical proteinBLASTP
58571165857994879alphabeta hydrolaseQuickGO ontology
5857991585918711974-methyl-3-oxoadipyl-CoA thioesteraseQuickGO ontologyBLASTP
585944558606831239outer membrane porinQuickGO ontologyBLASTP
58607995861614816citrate lyase subunit betaQuickGO ontologyBLASTP