Pre_GI Gene

Host: NC_018870:2316499 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018870:2316499 Thermacetogenium phaeum DSM 12270 chromosome, complete genome

Host Lineage: Thermacetogenium phaeum; Thermacetogenium; Thermoanaerobacteraceae; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Nitrogen fixation. Thermophilic strictly anaerobic bacterium oxidizing acetate to CO2 in syntrophic association with a methanogenic partner. Capable of growing with various substrates such as alcohols and methylated nitrogen compounds, and to reduce sulfate in the presence of acetate. Isolated from sludge of an anaerobic digester run at 58 degrees C. Thermacetogenium phaeum is a strictly anaerobic, homoacetogenic bacterium. It is exceptional because it can use the homoacetogenic Wood-Ljungdahl (CO- dehydrogenase) pathway both for acetate formation and acetate oxidation. Acetate oxidation is possible only in syntrophic cooperation with a methanogenic partner which maintains a low hydrogen and/or formate concentration in the coculture. With this, the bacterium operates close to the thermodynamic equilibrium of substrate conversion, similar to other syntrophically fermenting bacteria such as Syntrophomonas wolfei the genomes of which have been sequenced as well in the recent past.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23164992317452954thermophilic metalloprotease aminopeptidase T familyQuickGO ontologyBLASTP
231753523185451011beta-lactamase-like proteinQuickGO ontologyBLASTP
23185562318756201hypothetical proteinBLASTP
23188782319252375hypothetical proteinBLASTP
23194262319938513hypothetical proteinBLASTP
23205862321308723hypothetical protein
23213932321707315putative drug resistance transporter EmrBQacA subfamilyQuickGO ontology
23220112322775765IS4-like transposaseQuickGO ontologyBLASTP
23229692323265297cobalamin biosynthesis protein CbiMQuickGO ontologyBLASTP
23239132324188276hypothetical protein
232448923267532265putative SigF proteinQuickGO ontologyBLASTP
232674023284251686hypothetical proteinBLASTP
23284592328860402hypothetical proteinBLASTP
232901023305781569resolvaseQuickGO ontologyBLASTP
23305412331032492recombinaseQuickGO ontologyBLASTP
233099623325641569recombinaseQuickGO ontologyBLASTP
23326262332844219hypothetical proteinBLASTP
233289823339021005N-acetylmuramoyl-L-alanine amidaseQuickGO ontologyBLASTP
23338992334318420toxin secretionphage lysis holinQuickGO ontologyBLASTP
233442023373982979glycoside hydrolase family 18QuickGO ontologyBLASTP
233740323387551353phage minor structural proteinQuickGO ontologyBLASTP
233875523399691215phage tail componentQuickGO ontologyBLASTP
233996923421552187putative minor tail protein Gp26QuickGO ontologyBLASTP
23421832342374192hypothetical proteinBLASTP
23423712342754384hypothetical proteinBLASTP
23427542343353600phage major tail protein phi13 familyQuickGO ontologyBLASTP
23433592343703345hypothetical proteinBLASTP
23437002344131432phage protein HK97 gp10 familyQuickGO ontologyBLASTP
23441482344483336putative phage head-tail joining proteinQuickGO ontologyBLASTP
23444862344794309putative DNA packaging protein QLRG familyQuickGO ontologyBLASTP
234481623460181203phage major capsid protein HK97 familyQuickGO ontologyBLASTP
23460322346757726peptidase S14 ClpPQuickGO ontologyBLASTP
234669623480181323phage portal protein HK97 familyQuickGO ontologyBLASTP
23481262348530405hypothetical proteinBLASTP
234852723511932667phage terminaseQuickGO ontologyBLASTP
23512482351442195hypothetical proteinBLASTP
23514462351913468putative gamma-glutamylcyclotransferaseQuickGO ontologyBLASTP
23519782352877900putative amidoligaseQuickGO ontologyBLASTP
23530192353249231hypothetical proteinBLASTP
23532462353581336hypothetical proteinBLASTP
23535742354266693putative virulence proteinQuickGO ontologyBLASTP
235438323556361254DNA methylaseQuickGO ontologyBLASTP
235564223569401299DNA methylaseQuickGO ontologyBLASTP
23569152357097183hypothetical proteinBLASTP
23570972357648552putative bacteriophage protein phi-105-like proteinQuickGO ontologyBLASTP
23579132358149237ATP-binding protein IstB-like proteinQuickGO ontologyBLASTP
23587042359387684transposaseQuickGO ontologyBLASTP
23594162359733318hypothetical protein terminase-like proteinQuickGO ontologyBLASTP
23597742360190417transposase IS3IS911 familyQuickGO ontologyBLASTP
236018323614901308transposase for insertion sequence element IS21-like proteinQuickGO ontologyBLASTP
236172123631901470transposase for insertion sequences IS1326IS1353QuickGO ontologyBLASTP
23631872363951765ATP-binding protein IstB-like proteinQuickGO ontologyBLASTP
23642962364727432recombinaseQuickGO ontologyBLASTP
236471423662821569resolvaseQuickGO ontologyBLASTP
23663752367355981nigerythrinQuickGO ontologyBLASTP
23673582368029672putative rubredoxinQuickGO ontologyBLASTP
23681462368502357putative rubredoxinQuickGO ontologyBLASTP
23685042369343840ParAMinD-like ATPaseQuickGO ontologyBLASTP
23699052370183279metallo-beta-lactamase family proteinQuickGO ontologyBLASTP
23701882371063876cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
23710412371898858cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
23719002372268369dinitrogenase iron-molybdenum cofactor biosynthesis proteinQuickGO ontologyBLASTP
23722432372653411NifU-like Fe-S cluster assembly proteinQuickGO ontologyBLASTP
23726502373027378putative DNA-binding proteinQuickGO ontologyBLASTP
23729842373091108hypothetical protein
23730912373369279hypothetical protein
23738102375165135623S rRNA uracil-5--methyltransferase RumAQuickGO ontologyBLASTP
23754442376253810putative radical SAM domain-containing proteinQuickGO ontologyBLASTP
23763612376864504hypothetical proteinBLASTP
23770602377356297nucleotidyltransferaseQuickGO ontologyBLASTP
23773532377751399nucleotidyltransferase nucleotide binding domain proteinQuickGO ontologyBLASTP
23779802378156177putative ABC-type transporterQuickGO ontologyBLASTP
23783032378689387putative ABC-type transporterQuickGO ontologyBLASTP
237869023799551266putative outer efflux proteinQuickGO ontology
237996623811531188macrolide export ATP-bindingpermease protein MacBQuickGO ontologyBLASTP
238115923823581200RND-like efflux transporterQuickGO ontologyBLASTP
23823182383025708ABC-type antimicrobial peptide transport system ATPase componentQuickGO ontologyBLASTP
23830222383660639hypothetical proteinBLASTP