Pre_GI Gene

Host: NC_020389:1346358 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020389:1346358 Methanosarcina mazei Tuc01, complete genome

Host Lineage: Methanosarcina mazei; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This organism is a strictly anaerobic, non-motile, methane-producing archaeon. This organism can also aggregate forming large irregular shaped clumps of cells. Occasionally these aggregates can grow to 1000 microns or more in diameter. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Can be found in decaying leaf litter, garden soil, sewage treatment sludge digestors, black mud, feces of herbivores and other urban waste and sewage products.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
134635813474521095Zinc metalloproteaseQuickGO ontologyBLASTP
134800813495461539Pheromone shutdown proteinQuickGO ontologyBLASTP
13498011349914114hypothetical protein
13500741350967894Formylmethanofuran--tetrahydromethanopterin N- formyltransferaseQuickGO ontologyBLASTP
13517481352227480Chemotaxis protein CheDQuickGO ontologyBLASTP
13524681353118651Chemotaxis protein CheCQuickGO ontologyBLASTP
13533211354223903Chemotaxis protein methyltransferase CheRQuickGO ontologyBLASTP
135427313562822010Signal transduction histidine kinase CheAQuickGO ontologyBLASTP
135670013577701071Chemotaxis response regulator protein-glutamate methylesterase CheBQuickGO ontologyBLASTP
13579521358317366Chemotaxis regulatorQuickGO ontologyBLASTP
13592061359586381Two-component response regulatorQuickGO ontologyBLASTP
135986113619302070Methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
13621161362745630Positive regulator of CheA protein activity CheWQuickGO ontologyBLASTP
136282113641581338PermeaseQuickGO ontologyBLASTP
13644201364803384Iron dependent repressorQuickGO ontologyBLASTP
13650181366004987Zinc ABC transporter periplasmic-binding protein ZnuAQuickGO ontologyBLASTP
13661221366886765Zinc ABC transporter ATP-binding protein ZnuCQuickGO ontologyBLASTP
13669351367744810Zinc ABC transporter inner membrane permease protein ZnuBQuickGO ontologyBLASTP
13683101368765456hypothetical proteinBLASTP
137083513751184284internalinQuickGO ontologyBLASTP
13756491376539891Pyruvateferredoxin oxidoreductase beta subunitQuickGO ontologyBLASTP
137653613777441209Pyruvateferredoxin oxidoreductase alpha subunitQuickGO ontologyBLASTP
13777441378076333Pyruvateferredoxin oxidoreductase Delta subunitQuickGO ontologyBLASTP
13780731378621549Pyruvateferredoxin oxidoreductase gamma subunitQuickGO ontologyBLASTP
13805141381071558Signal peptidase IQuickGO ontologyBLASTP
138208313840261944Archaeal DNA polymerase II small subunitQuickGO ontologyBLASTP
138416313851881026Fe-S oxidoreductaseQuickGO ontologyBLASTP