Pre_GI Gene

Host: NC_021182:93000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:93000 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9302393505483hypothetical protein
9365394132480putative HD superfamily hydrolase possibly a nucleaseQuickGO ontologyBLASTP
9433695103768prolipoprotein diacylglyceryl transferaseQuickGO ontologyBLASTP
9533495543210hypothetical protein
9556695844279coat F domain-containing proteinQuickGO ontologyBLASTP
960169610590tRNA-SerQuickGO ontologyBLASTP
96528981561629DNA polymerase III subunit gammatauQuickGO ontologyBLASTP
9822198562342DNA-binding protein YbaBEbfC familyQuickGO ontologyBLASTP
9857799176600recombination protein RecRQuickGO ontologyBLASTP
9924099512273Protein of unknown function DUF2508QuickGO ontologyBLASTP
9953899792255pro-sigmaK processing inhibitor BofAQuickGO ontologyBLASTP
1054101055261175S ribosomal RNAQuickGO ontologyBLASTP
10569010577384tRNA-LeuQuickGO ontologyBLASTP
106526107218693sugar fermentation stimulation proteinQuickGO ontologyBLASTP
107333107872540Zn-finger containing NTP pyrophosphohydrolaseQuickGO ontologyBLASTP
1079981091821185ABC-type transport system involved in multi-copper enzyme maturation permease componentQuickGO ontologyBLASTP
109182110129948ABC-type multidrug transport system ATPase componentQuickGO ontologyBLASTP
110673111368696hypothetical proteinBLASTP
111393111554162hypothetical proteinBLASTP
1115841130951512Zn-dependent carboxypeptidaseQuickGO ontologyBLASTP
113209113394186hypothetical proteinBLASTP
113535114143609hypothetical proteinBLASTP
1144601156261167methylase involved in ubiquinonemenaquinone biosynthesisQuickGO ontologyBLASTP
116081117019939acetyltransferase ribosomal protein N-acetylaseQuickGO ontologyBLASTP
1222261223421175S ribosomal RNAQuickGO ontologyBLASTP
122662123066405LysM domain-containing proteinQuickGO ontology
123127123723597uracil-DNA glycosylaseQuickGO ontologyBLASTP
124047124919873hypothetical protein
1250111261441134serine-pyruvate aminotransferasearchaeal aspartate aminotransferaseQuickGO ontologyBLASTP
1314901316061175S ribosomal RNAQuickGO ontologyBLASTP
13161613169176tRNA-PheQuickGO ontologyBLASTP
131923132378456PeroxiredoxinQuickGO ontologyBLASTP
132946133116171hypothetical protein
133382134110729HAD-superfamily subfamily IB hydrolase TIGR01490QuickGO ontologyBLASTP
1342201356471428putative Zn-dependent protease-like proteinQuickGO ontologyBLASTP
1356441369451302putative Zn-dependent protease-like proteinQuickGO ontologyBLASTP
137136137798663NTP pyrophosphohydrolaseQuickGO ontologyBLASTP
1378181389151098hypothetical proteinBLASTP