Pre_GI Gene

Host: AP010958:3474077 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

AP010958:3474077 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34740773475012936DNA-binding transcriptional dual regulator LysRQuickGO ontologyBLASTP
34749993475691693predicted racemaseQuickGO ontologyBLASTP
347582034772381419arabinose transporter AraEQuickGO ontologyBLASTP
347755334783147622-deoxy-D-gluconate 3-dehydrogenase KduDQuickGO ontologyBLASTP
34783443479180837predicted 5-keto 4-deoxyuronate isomeraseQuickGO ontologyBLASTP
347946734806481182predicted acyltransferaseQuickGO ontologyBLASTP
348090334821321230predicted transporterQuickGO ontologyBLASTP
34825923483224633conserved hypothetical proteinBLASTP
34835583484367810predicted transcriptional regulatorQuickGO ontologyBLASTP
34843603484842483conserved predicted proteinQuickGO ontologyBLASTP
34849913485260270BLASTP
34852723485427156BLASTP
34856093486046438conserved predicted proteinQuickGO ontologyBLASTP
34863243486815492predicted chaperoneQuickGO ontologyBLASTP
348714934885251377predicted transcriptional regulatorQuickGO ontologyBLASTP
34886933488911219conserved predicted proteinQuickGO ontologyBLASTP
34890963489470375peptidoglycan-binding-like protein precursorQuickGO ontologyBLASTP
34895153489958444BLASTP
34899923490147156BLASTP
34903693490800432conserved predicted proteinQuickGO ontologyBLASTP
34910173491598582hypothetical proteinBLASTP
34916143492150537BLASTP
34922023492348147BLASTP
34923893492676288type III secretion protein EprJQuickGO ontologyBLASTP
34927813492936156type III secretion protein EprIQuickGO ontologyBLASTP
349295034941311182type III secretion protein EprHQuickGO ontologyBLASTP
34943893494820432putative transcriptional regulator EtrAQuickGO ontologyBLASTP
34952453495637393BLASTP
34956343496365732BLASTP
34963743497141768type III secretion protein EpaRQuickGO ontologyBLASTP
34971433497403261type III secretion protein EpaQQuickGO ontologyBLASTP
34974133498078666type III secretion protein EpaPQuickGO ontologyBLASTP
34980683498640573BLASTP
34986503499015366BLASTP
349914735007571611conserved predicted proteinQuickGO ontologyBLASTP
35011283501454327putative IS629 transposase OrfAQuickGO ontologyBLASTP
35014543502341888putative IS629 transposase OrfBQuickGO ontologyBLASTP
35026133502906294hypothetical proteinBLASTP
35030353503598564hypothetical proteinBLASTP
35042093504838630hypothetical proteinBLASTP
350483935064641626putative integraseQuickGO ontologyBLASTP
3506599350667274tRNA-GlyQuickGO ontologyBLASTP
35067513507506756tetratricopeptide repeat transcriptional regulatorQuickGO ontologyBLASTP
350792135102182298xanthine dehydrogenase molybdenum binding subunitQuickGO ontologyBLASTP
35102293511107879xanthine dehydrogenase FAD-binding subunitQuickGO ontologyBLASTP
35111043511583480xanthine dehydrogenase Fe-S binding subunitQuickGO ontologyBLASTP
351162335133951773predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP