Pre_GI Gene

Host: NC_000962:3474000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000962:3474000 Mycobacterium tuberculosis H37Rv, complete genome

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
347400734753771371NADPHADRENODOXIN OXIDOREDUCTASE FPRA NADPH-FERREDOXIN REDUCTASEQuickGO ontologyBLASTP
347537834769611584POSSIBLE ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE AGPS ALKYL-DHAP SYNTHASE ALKYLGLYCERONE-PHOSPHATE SYNTHASEQuickGO ontologyBLASTP
34770603477500441hypothetical proteinBLASTP
347764934787281080PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1QuickGO ontologyBLASTP
34787793479174396PROBABLE PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE MOAB1 PHS 4-ALPHA-HYDROXY-TETRAHYDROPTERIN DEHYDRATASE PTERIN-4-A-CARBINOLAMINE DEHYDRATASE PQuickGO ontologyBLASTP
34791713479683513molybdenum cofactor biosynthesis protein CQuickGO ontologyBLASTP
34797003479951252PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN D MOAD1 MOLYBDOPTERIN CONVERTING FACTOR SMALL SUBUNIT MOLYBDOPTERIN MPT CONVERTING FACTOR SUBUQuickGO ontologyBLASTP
34800743480742669POSSIBLE PHOSPHATASEQuickGO ontologyBLASTP
34807593481289531hypothetical proteinBLASTP
348145134826981248PROBABLE TRANSPOSASEQuickGO ontologyBLASTP
348277634839451170PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN MOEB2 MPT-SYNTHASE SULFURYLASE MOLYBDOPTERIN SYNTHASE SULPHURYLASEQuickGO ontologyBLASTP
34839743484807834PROBABLE THIOSULFATE SULFURTRANSFERASE CYSA3 RHODANESE-LIKE PROTEIN THIOSULFATE CYANIDE TRANSSULFURASE THIOSULFATE THIOTRANSFERASEQuickGO ontologyBLASTP
34848093485111303CONSERVED HYPOTHETICAL PROTEIN SSEC1QuickGO ontologyBLASTP
34851323485575444PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN E MOAE1 MOLYBDOPTERIN CONVERTING FACTOR LARGE SUBUNIT MOLYBDOPTERIN MPT CONVERTING FACTOR SUBUQuickGO ontologyBLASTP
34855723486174603hypothetical proteinBLASTP
348650934877111203PROBABLE CYTOCHROME P450 141 CYP141QuickGO ontologyBLASTP
34880893488559471hypothetical proteinBLASTP
34885693489063495hypothetical proteinBLASTP
34895063490375870PROBABLE TRANSCRIPTIONAL REGULATORY PROTEINQuickGO ontologyBLASTP
349047634916511176PPE FAMILY PROTEINQuickGO ontologyBLASTP
34918083492122315hypothetical proteinBLASTP
349214734931811035hypothetical proteinBLASTP