Pre_GI Gene

Host: NC_000962:3781501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000962:3781501 Mycobacterium tuberculosis H37Rv, complete genome

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
378150137847403240DNA polymerase III subunit alphaQuickGO ontologyBLASTP
378493237862721341hypothetical proteinBLASTP
378631437874891176POSSIBLE TREHALOSE 6-PHOSPHATE PHOSPHATASE OTSB2 TREHALOSE-PHOSPHATASE TPPQuickGO ontologyBLASTP
37877263788367642PROBABLE ENOYL-CoA HYDRATASE ECHA18 ENOYL HYDRASE UNSATURATED ACYL-CoA HYDRATASE CROTONASEQuickGO ontologyBLASTP
37883683788616249PROBABLE ENOYL-CoA HYDRATASE FRAGMENT ECHA181 ENOYL HYDRASE UNSATURATED ACYL-CoA HYDRATASE CROTONASEQuickGO ontologyBLASTP
378862137900481428PROBABLE AMIDASE AMID ACYLAMIDASE ACYLASEQuickGO ontologyBLASTP
37901563790809654hypothetical proteinBLASTP
379084837923531506POSSIBLE CYCLASEQuickGO ontologyBLASTP
37923583793248891hypothetical proteinBLASTP
3793257379486716111-deoxy-D-xylulose-5-phosphate synthaseQuickGO ontologyBLASTP
37951003795984885PROBABLE TRANSPOSASEQuickGO ontologyBLASTP
37960353796361327PROBABLE TRANSPOSASEQuickGO ontologyBLASTP
37964483797437990PROBABLE LYTB-RELATED PROTEIN LYTB1QuickGO ontologyBLASTP
379743737984891053POSSIBLE POLYPRENYL SYNTHETASE IDSB POLYPRENYL TRANSFERASE POLYPRENYL DIPHOSPHATE SYNTHASEQuickGO ontologyBLASTP
37992433799635393hypothetical proteinBLASTP
37996353799943309hypothetical proteinBLASTP
38000923800796705POSSIBLE TRANSPOSASEQuickGO ontologyBLASTP
38007863801463678POSSIBLE TRANSPOSASEQuickGO ontologyBLASTP
380165338038482196PE-PGRS FAMILY PROTEINQuickGO ontologyBLASTP
38039193804791873POSSIBLE DEHYDROGENASEQuickGO ontologyBLASTP
38048653805575711PROBABLE CONSERVED LIPOPROTEIN LPQDQuickGO ontologyBLASTP
380562138075731953short chain dehydrogenaseQuickGO ontologyBLASTP