Pre_GI Gene

Host: NC_002655:3769643 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002655:3769643 Escherichia coli O157:H7 EDL933, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (substrain) is considered a reference strain of O157:H7, which was first isolated during an outbreak in 1982. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora.E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
37687213769656936positive regulator for lysQuickGO ontologyBLASTP
37696433770335693putative resistance proteinsQuickGO ontologyBLASTP
377046437718821419low-affinity L-arabinose transport system proton symport proteinQuickGO ontologyBLASTP
377219737729587622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
377298837738248375-keto-4-deoxyuronate isomeraseQuickGO ontologyBLASTP
377411137752951185acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
377554737767761230putative transporter proteinQuickGO ontologyBLASTP
37771763777868693hypothetical proteinBLASTP
37782023779011810putative sensory transducerQuickGO ontologyBLASTP
37790953779487393hypothetical proteinBLASTP
37796363780073438hypothetical proteinBLASTP
37802013780437237hypothetical proteinBLASTP
37804913780982492hypothetical proteinBLASTP
37812083781699492hypothetical proteinBLASTP
378203437834101377putative invasion proteinQuickGO ontologyBLASTP
37835773783795219hypothetical proteinBLASTP
37838803784383504hypothetical proteinBLASTP
37844023784848447putative 2-component transcriptional regulatorQuickGO ontologyBLASTP
37852013785335135hypothetical protein
37852573785688432hypothetical proteinBLASTP
37857053785965261hypothetical proteinBLASTP
37865043787238735putative lipoprotein of type III secretion apparatusQuickGO ontologyBLASTP
37872353787567333putative Type III secretion apparatus proteinQuickGO ontologyBLASTP
37878663788654789hypothetical proteinBLASTP
3788951378903484hypothetical proteinBLASTP
37892833789783501hypothetical proteinBLASTP
379014037912611122type III secretion proteinQuickGO ontologyBLASTP
37912703791506237putative integral membrane protein-component of typeIII secretion apparatusQuickGO ontologyBLASTP
37915853792037453type III secretion apparatus proteinQuickGO ontologyBLASTP
37920393792299261type III secretion apparatus proteinQuickGO ontologyBLASTP
37923103792975666putative integral membrane protein-component of typeIII secretion apparatusQuickGO ontologyBLASTP
37929653793951987type III secretion proteinQuickGO ontologyBLASTP
37939113794480570type III secretion apparatus proteinQuickGO ontologyBLASTP
37945533794786234hypothetical proteinBLASTP
37947643795099336type III secretion apparatus proteinQuickGO ontologyBLASTP
379521237965311320type III secretion system ATPaseQuickGO ontologyBLASTP
379653637985962061type III secretion apparatus proteinQuickGO ontologyBLASTP
379858937997341146putative secreted proteinQuickGO ontologyBLASTP
379973938014421704type III secretion apparatus proteinQuickGO ontologyBLASTP
38014393802188750putative regulatory protein for type III secretion apparatusQuickGO ontologyBLASTP
38025343802713180hypothetical proteinBLASTP
380278038038081029hypothetical proteinBLASTP
38038223804427606hypothetical proteinBLASTP
3804619380469274tRNA-GlyQuickGO ontologyBLASTP
38048173805488672putative lipoproteinQuickGO ontologyBLASTP
380598238082402259hypothetical proteinBLASTP
38082513809129879putative dehydrogenaseQuickGO ontologyBLASTP
38091263809605480putative dehydrogenaseQuickGO ontologyBLASTP
380964538114231779putative transcriptional regulatorQuickGO ontologyBLASTP
381189938130891191ornithine carbamoyltransferaseQuickGO ontologyBLASTP
381314738143431197diaminopropionate ammonia-lyaseQuickGO ontologyBLASTP