Pre_GI Gene

Host: NC_003030:3251941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003030:3251941 Clostridium acetobutylicum ATCC 824, complete genome

Host Lineage: Clostridium acetobutylicum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated in 1924 from garden soil in Connecticut, USA, by E. Wyer and L. Rettger. It is one of the best studied solventogenic clostridia. Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism is a benign saccharolytic and proteolytic soil bacterium capable of producing a number of organic solvents (solventogenic bacterium) through fermentation of various organic compounds. acetobutyricum were isolated by Chaim Weizman during the World War I and used to develop industrial starch-based acetone, butanol and ethanol fermentation processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
32519413252744804Predicted permease Cobalt permease subfamilyQuickGO ontologyBLASTP
32527413253601861ABC-type transporter ATPase component cobalt transporters subfamilyQuickGO ontologyBLASTP
32535863254431846ABC-type transporter ATPase component cobalt transporters subfamilyQuickGO ontologyBLASTP
3254512325485634550S ribosomal protein L17QuickGO ontologyBLASTP
32548783255825948DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
3255889325650962130S ribosomal protein S4QuickGO ontologyBLASTP
3256537325693239630S ribosomal protein S11QuickGO ontologyBLASTP
3256961325733237230S ribosomal protein S13QuickGO ontologyBLASTP
32574473257560114Ribosomal protein L36QuickGO ontologyBLASTP
32575763257794219Translation initiation factor IF-1QuickGO ontologyBLASTP
32578023258080279Ribosomal protein L14E archaealeukaryotic typeQuickGO ontologyBLASTP
32580933258845753BLASTP
32588463259493648adenylate kinaseQuickGO ontologyBLASTP
325951532607981284preprotein translocase SecYQuickGO ontologyBLASTP
3260799326123944150S ribosomal protein L15QuickGO ontologyBLASTP
32612513261436186Ribosomal protein L30QuickGO ontologyBLASTP
32614493261946498Ribosomal protein S5QuickGO ontologyBLASTP
3261971326232435450S ribosomal protein L18QuickGO ontologyBLASTP
3262346326288554050S ribosomal protein L6QuickGO ontologyBLASTP
3262912326331039930S ribosomal protein S8QuickGO ontologyBLASTP
32633423263527186Ribosomal protein S14QuickGO ontologyBLASTP
3263543326408554350S ribosomal protein L5QuickGO ontologyBLASTP
3264108326442832150S ribosomal protein L24QuickGO ontologyBLASTP
3264445326481336950S ribosomal protein L14QuickGO ontologyBLASTP
3264839326509325530S ribosomal protein S17QuickGO ontologyBLASTP
32651163265319204Ribosomal protein L29QuickGO ontologyBLASTP
3265309326575244450S ribosomal protein L16QuickGO ontologyBLASTP
3265770326643866930S ribosomal protein S3QuickGO ontologyBLASTP
3266455326679033650S ribosomal protein L22QuickGO ontologyBLASTP
32668133267094282Ribosomal protein S19QuickGO ontologyBLASTP
3267163326799683450S ribosomal protein L2QuickGO ontologyBLASTP
32680503268346297Ribosomal protein L23QuickGO ontologyBLASTP
3268346326896662150S ribosomal protein L4QuickGO ontologyBLASTP
3268991326962063050S ribosomal protein L3QuickGO ontologyBLASTP
32696833269991309Ribosomal protein S10QuickGO ontologyBLASTP
32700083270190183Uncharacterized C4-type Zn-finger containing proteinQuickGO ontologyBLASTP
327030032714931194elongation factor TuQuickGO ontologyBLASTP
327152332735862064translation elongation factor EF-GQuickGO ontologyBLASTP
3273758327422847130S ribosomal protein S7QuickGO ontologyBLASTP
3274414327479137830S ribosomal protein S12QuickGO ontologyBLASTP
32748843275123240Ribosomal protein HS6-typeQuickGO ontologyBLASTP
327527132788193549DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
327884132825663726DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
32826933282941249BLASTP
32829913283362372Ribosomal protein L7L12QuickGO ontologyBLASTP
3283414328392050750S ribosomal protein L10QuickGO ontologyBLASTP
3284106328479569050S ribosomal protein L1QuickGO ontologyBLASTP
3284848328527342650S ribosomal protein L11QuickGO ontologyBLASTP
32853073285828522transcription antitermination protein NusGQuickGO ontologyBLASTP
32858783286108231Preprotein translocase subunit SecEQuickGO ontologyBLASTP
3286143328629215050S ribosomal protein L33QuickGO ontologyBLASTP
3287916328798873tRNA-ThrQuickGO ontology
3288000328807172tRNA-GlyQuickGO ontology
32881523288790639RNA polymerase sigma-70 factorQuickGO ontologyBLASTP
32888563289374519Uncharacterized conserved protein YACP Bsubtilis orthologQuickGO ontologyBLASTP
32893803290138759RRNA methylase YACO Bsubtilis orthologQuickGO ontologyBLASTP