Pre_GI Gene

Host: NC_003197:2152994 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003197:2152994 Salmonella typhimurium LT2, complete genome

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
215191821529971080histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
215299421540611068imidazole glycerol-phosphate dehydratasehistidinol phosphataseQuickGO ontologyBLASTP
21540582154651594imidazole glycerol phosphate synthase subunit HisHQuickGO ontologyBLASTP
215465121553887381-5-phosphoribosyl-5-5- phosphoribosylaminomethylideneamino imidazole-4-carboxamide isomeraseQuickGO ontologyBLASTP
21553702156146777imidazole glycerol phosphate synthase subunit HisFQuickGO ontologyBLASTP
21561402156751612bifunctional phosphoribosyl-AMP cyclohydrolasephosphoribosyl-ATP pyrophosphatase proteinQuickGO ontologyBLASTP
21568322157815984lipopolysaccharide O-antigen chain length regulatorQuickGO ontologyBLASTP
215795821591241167UDP-glucoseGDP-mannose dehydrogenaseQuickGO ontologyBLASTP
2159361216076714076-phosphogluconate dehydrogenaseQuickGO ontologyBLASTP
216093121623611431undecaprenol-phosphate galactosephosphotransferaseO-antigen transferaseQuickGO ontologyBLASTP
216243321638661434phosphomannomutaseQuickGO ontologyBLASTP
216385321652921440mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
21652932166237945rhamnosyl transferaseQuickGO ontologyBLASTP
216623821672991062mannosyl transferaseQuickGO ontologyBLASTP
216761921686201002abequosyltransferaseQuickGO ontologyBLASTP
216862521699171293putative O-antigen transferaseQuickGO ontologyBLASTP
21699992170898900CDP-abequose synthaseQuickGO ontologyBLASTP
217092621722391314CDP-6-deoxy-D-xylo-4-hexulose-3-dehydraseQuickGO ontologyBLASTP
217226621733451080CDP glucose 46-dehydrataseQuickGO ontologyBLASTP
21733502174123774glucose-1-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
21741202175112993CDP-6-deoxy-delta-34-glucoseen reductaseQuickGO ontologyBLASTP
21751182175669552dTDP-4deoxyrhamnose 35 epimeraseQuickGO ontologyBLASTP
21756702176548879dTDP-glucose pyrophosphorylaseQuickGO ontologyBLASTP
21765962177495900TDP-rhamnose synthetaseQuickGO ontologyBLASTP
217749521785801086dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
21789572179850894putative glucose-1-phosphate uridylyltransferase subunitQuickGO ontologyBLASTP
218002821814311404putative colanic acid biosynthetic proteinQuickGO ontologyBLASTP
218144221826621221putative glycosyl transferaseQuickGO ontologyBLASTP
218265921839391281putative galactokinaseQuickGO ontologyBLASTP
218396121854391479putative exportQuickGO ontologyBLASTP
218557221869661395UDP-glucose lipid carrier transferaseglucose-1-phosphate transferaseQuickGO ontologyBLASTP