Pre_GI Gene

Host: NC_003197:815964 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003197:815964 Salmonella typhimurium LT2, complete genome

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8159648172561293translocation protein TolB precursorQuickGO ontologyBLASTP
817291817815525peptidoglycan-associated lipoprotein precursorQuickGO ontologyBLASTP
817825818613789putative periplasmic proteinQuickGO ontologyBLASTP
81877581884773tRNA-LysQuickGO ontology
81906181913373tRNA-LysQuickGO ontologyBLASTP
81918681925873tRNA-LysQuickGO ontologyBLASTP
81939681946873tRNA-LysQuickGO ontologyBLASTP
8202338212761044quinolinate synthetaseQuickGO ontologyBLASTP
821301822020720nucleosidepurinepyrimidine transporterQuickGO ontologyBLASTP
822017822955939zinc transporter ZitBQuickGO ontologyBLASTP
823066823452387hypothetical proteinBLASTP
82377282482410533-deoxy-7-phosphoheptulonate synthaseQuickGO ontologyBLASTP
824918825463546fumarate hydrataseQuickGO ontologyBLASTP
825478826323846fumarate hydrataseQuickGO ontologyBLASTP
826453827343891transcriptional regulatorQuickGO ontologyBLASTP
827344828327984transcriptional regulatorQuickGO ontologyBLASTP
8285718298181248putative cation transporterQuickGO ontologyBLASTP
829868830113246putative oxaloacetate decarboxylase subunit gammaQuickGO ontologyBLASTP
8319198332201302oxaloacetate decarboxylase beta chainQuickGO ontologyBLASTP
833339834037699putative cytoplasmic proteinQuickGO ontologyBLASTP
8344178354961080putative ABC transport proteinQuickGO ontologyBLASTP
835496836272777putative ABC-type cobalaminFe3-siderophore transport componentQuickGO ontologyBLASTP
836363837115753phosphoglyceromutaseQuickGO ontologyBLASTP
8373398383791041galactose-1-epimeraseQuickGO ontologyBLASTP
8383738395211149galactokinaseQuickGO ontologyBLASTP