Pre_GI Gene

Host: NC_003198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:3586000 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3586055358655249850S ribosomal protein L10QuickGO ontologyBLASTP
3586968358767270550S ribosomal protein L1QuickGO ontologyBLASTP
3587676358810442950S ribosomal protein L11QuickGO ontologyBLASTP
35882623588807546transcription antitermination protein NusGQuickGO ontologyBLASTP
35888093589192384translocaseQuickGO ontologyBLASTP
358942235906061185elongation factor TuQuickGO ontologyBLASTP
3590722359079776tRNA-ThrQuickGO ontologyBLASTP
3590804359087875tRNA-GlyQuickGO ontology
3590995359107985tRNA-TyrQuickGO ontologyBLASTP
3591088359116376tRNA-ThrQuickGO ontology
35911833591356174hypothetical proteinBLASTP
35915653592515951pantothenate kinaseQuickGO ontologyBLASTP
35925503593512963biotin--protein ligaseQuickGO ontologyBLASTP
359350935945371029UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
35947863594905120BLASTP
359500635980113006BLASTP
3598194359826976tRNA-AlaQuickGO ontologyBLASTP
3598381359845777tRNA-IleQuickGO ontologyBLASTP
359852736000681542BLASTP
36004513601233783glutamate racemaseQuickGO ontologyBLASTP
360124736030911845vitamin B12 receptor proteinQuickGO ontologyBLASTP
360346536045651101tRNA uracil-5--methyltransferaseQuickGO ontologyBLASTP
36046123604971360hypothetical proteinBLASTP
36049873605622636possible TetR-family trancriptional regulatory proteinQuickGO ontologyBLASTP
360582136072211401soluble pyridine nucleotide transhydrogenaseQuickGO ontologyBLASTP
36072043608121918hydrogen peroxide-inducible regulon activatorQuickGO ontologyBLASTP