Pre_GI Gene

Host: NC_003198:1621347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:1621347 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
162134716224951149cyclopropane-fatty-acyl-phospholipid synthaseQuickGO ontologyBLASTP
16225371623178642riboflavin synthase subunit alphaQuickGO ontologyBLASTP
162339516247681374multidrug efflux protein NorAQuickGO ontologyBLASTP
1624920162499677tRNA-ValQuickGO ontologyBLASTP
1625007162508377tRNA-ValQuickGO ontologyBLASTP
162524116262991059putative type III secretion proteinQuickGO ontologyBLASTP
16262961627075780putative type III secretion proteinQuickGO ontologyBLASTP
16270761627342267putative type III secretion proteinQuickGO ontologyBLASTP
16273391627986648putative type III secretion proteinQuickGO ontologyBLASTP
16280541629022969type III secretion proteinQuickGO ontologyBLASTP
16290031629377375putative type III secretion proteinQuickGO ontologyBLASTP
16293581629735378putative type III secretion proteinQuickGO ontologyBLASTP
162973816310391302type III secretion system ATPaseQuickGO ontologyBLASTP
163102916330742046putative type III secretion proteinQuickGO ontologyBLASTP
16330591633427369putative pathogenicity island proteinQuickGO ontologyBLASTP
16334851634477993putative secretion system proteinQuickGO ontologyBLASTP
16344671635141675putative pathogenicity island proteinQuickGO ontologyBLASTP
16351381635686549putative pathogenicity island proteinQuickGO ontologyBLASTP
16357041636453750putative pathogenicity island lipoproteinQuickGO ontologyBLASTP
16364501636698249putative pathogenicity island proteinQuickGO ontologyBLASTP
16367101636937228putative pathogenicity island proteinQuickGO ontologyBLASTP
16369781637193216putative pathogenicity island proteinQuickGO ontologyBLASTP
16372871637976690putative pathogenicity island effector proteinQuickGO ontologyBLASTP
16379731638755783putative pathogenicity island effector proteinQuickGO ontologyBLASTP
16387711639205435putative pathogenicity island proteinQuickGO ontologyBLASTP
16392571639673417putative pathogenicity island effector proteinQuickGO ontologyBLASTP
16396761640263588putative pathogenicity island effector proteinQuickGO ontologyBLASTP
164027916417331455putative pathogenicity island effector proteinQuickGO ontologyBLASTP
16417361642209474putative Type III secretion system chaperone proteinQuickGO ontologyBLASTP
16422061642796591putative pathogenicity island effector effector proteinQuickGO ontologyBLASTP
16428031643129327putative pathogenicity island proteinQuickGO ontologyBLASTP
16433321643574243putative secretion system proteinQuickGO ontologyBLASTP
164358216447931212putative pathogenicity island proteinQuickGO ontologyBLASTP
164477416462671494putative outer membrane secretory proteinQuickGO ontologyBLASTP