Pre_GI Gene

Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:3666544 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
366654436677131170succinyl-CoA synthetase subunit betaQuickGO ontologyBLASTP
366794736695571611two-component system sensor proteinQuickGO ontologyBLASTP
366975736711601404two-component system regulatory proteinQuickGO ontologyBLASTP
367157936733121734pilus biogenesis proteinQuickGO ontologyBLASTP
36733773673811435pilinQuickGO ontologyBLASTP
36738913674331441pilinQuickGO ontologyBLASTP
367465836759141257fimbrial assembly proteinQuickGO ontologyBLASTP
36759213676784864type IV pre-pilin leader peptidaseQuickGO ontologyBLASTP
36767983677421624dephospho-CoA kinaseQuickGO ontologyBLASTP
36779203678354435hypothetical proteinBLASTP
36784293678719291hypothetical proteinBLASTP
36787163679207492hypothetical proteinBLASTP
367935036805071158two-component system sensor proteinQuickGO ontologyBLASTP
36806773681354678two-component system regulatory proteinQuickGO ontologyBLASTP
36820043682879876ribosomal protein S6 modification proteinQuickGO ontologyBLASTP
368337236855012130glycogen debranching enzymeQuickGO ontologyBLASTP
36860403686432393virulence regulatorQuickGO ontologyBLASTP
36865233686918396hypothetical proteinBLASTP
36870953687250156hypothetical proteinBLASTP
36879063688184279ISxac3 transposaseQuickGO ontologyBLASTP
36882383689056819degenerated ISxac3 transposaseQuickGO ontologyBLASTP
36891493690087939hypothetical proteinBLASTP
369025436914981245hypothetical proteinBLASTP
369184336933811539hypothetical proteinBLASTP
36939773694735759hypothetical proteinBLASTP
36947283695654927hypothetical proteinBLASTP
369620436972291026hypothetical proteinBLASTP
369761136986331023hypothetical proteinBLASTP
369899237003591368IS1478 transposaseQuickGO ontologyBLASTP
37005203700786267ISxcc1 transposaseQuickGO ontologyBLASTP
37008613701628768ISxcc1 transposaseQuickGO ontologyBLASTP
37016153702400786IS1477 transposaseQuickGO ontologyBLASTP
37027983703457660hypothetical proteinBLASTP
37034543703984531hypothetical proteinBLASTP
37043823704930549hypothetical proteinBLASTP
370499937061381140VirB6 proteinQuickGO ontologyBLASTP
37061703706682513hypothetical proteinBLASTP
370783937093771539sensor kinaseQuickGO ontologyBLASTP
37094563710106651hypothetical proteinBLASTP
371056737138303264DNA helicase related proteinQuickGO ontologyBLASTP
37141553714421267truncated IS1477 transposaseQuickGO ontologyBLASTP
37146463715413768ISxcc1 transposaseQuickGO ontologyBLASTP
37154883715754267ISxcc1 transposaseQuickGO ontologyBLASTP
37157763716186411truncated IS1477 transposaseQuickGO ontologyBLASTP
37162253716494270IS1404 transposaseQuickGO ontologyBLASTP
371630837173331026IS1404 transposaseQuickGO ontologyBLASTP
37174603717696237truncated IS1477 transposaseQuickGO ontologyBLASTP
371812137220413921hypothetical proteinBLASTP
37227943723678885regulatory protein bphRQuickGO ontologyBLASTP
37237063723999294hypothetical proteinBLASTP
37241023724752651hypothetical proteinBLASTP
372482337258241002hypothetical proteinBLASTP
372646137283501890phage-related integraseQuickGO ontologyBLASTP
372877837305621785lipaseesteraseQuickGO ontologyBLASTP
37307513730951201sulfur carrier protein ThiSQuickGO ontologyBLASTP
37310003731794795thiazole synthaseQuickGO ontologyBLASTP
37319393732724786tRNA guanine-N7-methyltransferaseQuickGO ontologyBLASTP
373279137346531863sulfur deprivation response regulatorQuickGO ontologyBLASTP
37349993735340342hypothetical proteinBLASTP
37357573736032276hypothetical protein
37361253736838714fumarylacetoacetate hydrolaseQuickGO ontologyBLASTP
37369013737332432large-conductance mechanosensitive channelQuickGO ontologyBLASTP
373744737385741128aminopeptidaseQuickGO ontologyBLASTP
37385873738865279aminopeptidaseQuickGO ontologyBLASTP
373891737399661050LacI family transcription regulatorQuickGO ontologyBLASTP
37403153741802148814-beta-cellobiosidaseQuickGO ontologyBLASTP