Pre_GI Gene

Host: NC_003911:480202 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003911:480202 Silicibacter pomeroyi DSS-3, complete genome

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
479522480205684alkylphosphonate utilization protein PhnLQuickGO ontologyBLASTP
480202480750549alkylphosphonate utilization protein PhnNQuickGO ontologyBLASTP
480732481415684hypothetical proteinBLASTP
4814694826111143alkylphosphonate utilization protein PhnMQuickGO ontologyBLASTP
482616483182567hypothetical protein
483205483456252hypothetical protein
4836074846741068ISSpo8 transposaseQuickGO ontologyBLASTP
48538748546377tRNA-ArgQuickGO ontology
485499485975477acetyltransferase GNAT familyQuickGO ontologyBLASTP
485983486294312NADH-ubiquinone oxidoreductase family proteinQuickGO ontologyBLASTP
486480487127648microcystin dependent protein putativeQuickGO ontologyBLASTP
48756848841084350S ribosomal protein L2QuickGO ontologyBLASTP
488414488692279ribosomal protein S19QuickGO ontologyBLASTP
48869648907638150S ribosomal protein L22QuickGO ontologyBLASTP
48907648978370830S ribosomal protein S3QuickGO ontologyBLASTP
48979649020941450S ribosomal protein L16QuickGO ontologyBLASTP
4914904928391350ISSpo2 transposaseQuickGO ontologyBLASTP
4934324944331002calcium-binding domain proteinQuickGO ontology
494436495119684hypothetical proteinBLASTP
495649496491843cyclic nucleotide-binding domain proteinQuickGO ontology
496675496875201ribosomal protein L29QuickGO ontologyBLASTP
496888497118231ribosomal protein S17QuickGO ontologyBLASTP
497221497589369ribosomal protein L14QuickGO ontologyBLASTP
497592497903312ribosomal protein L24QuickGO ontologyBLASTP
497896498456561ribosomal protein L5QuickGO ontologyBLASTP
498474498779306ribosomal protein S14QuickGO ontologyBLASTP