Pre_GI Gene

Host: NC_004431:4270305 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004431:4270305 Escherichia coli CFT073, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
427030542726232319Putative family 31 glucosidase yicIQuickGO ontologyBLASTP
427263342740721440Hypothetical symporter yicJQuickGO ontologyBLASTP
4274308427439891tRNA-SecQuickGO ontologyBLASTP
427470242758861185Putative prophage integraseQuickGO ontologyBLASTP
427629742773401044ShiA homologQuickGO ontologyBLASTP
42774834277713231hypothetical proteinBLASTP
427773842788321095Putative transcriptional regulatorQuickGO ontologyBLASTP
427901342803711359Hexuronate transporterQuickGO ontologyBLASTP
42803804281033654Putative glucosidaseQuickGO ontologyBLASTP
428098442827681785Putative glucosidaseQuickGO ontologyBLASTP
42835444283861318IS1 protein InsBQuickGO ontologyBLASTP
42838724284084213hypothetical proteinBLASTP
428419842856971500Putative amino acid antiporterQuickGO ontologyBLASTP
428577242881412370hypothetical proteinBLASTP
428824642897151470Putative antiporterQuickGO ontologyBLASTP
42899684290240273Insertion element IS1 12356 protein insAQuickGO ontologyBLASTP
42902674290626360Insertion element IS1 156 protein insBQuickGO ontologyBLASTP
42912494291626378hypothetical proteinBLASTP
429196642931171152Transposase insI for insertion sequence element IS30BCDQuickGO ontologyBLASTP
42932664294078813Transposase insF for insertion sequence IS3ABCDEfAQuickGO ontologyBLASTP
42940994294284186hypothetical proteinBLASTP
42943314294439109spot 42 RNAQuickGO ontology
429441942957471329hypothetical proteinBLASTP
42957554296330576hypothetical proteinBLASTP
42968834297608726hypothetical proteinBLASTP
429760542989241320hypothetical proteinBLASTP
42989064299658753hypothetical proteinBLASTP
429965843014421785hypothetical proteinBLASTP
43015744302017444BLASTP
43024334302867435BLASTP
43031064303504399hypothetical proteinBLASTP
43035764304013438hypothetical proteinBLASTP
43040304304158129hypothetical proteinBLASTP
43046064304797192hypothetical proteinBLASTP
43048504305158309hypothetical proteinBLASTP
43051334305537405hypothetical proteinBLASTP
43051794305580402hypothetical proteinBLASTP
430602943071471119Putative propanol dehydrogenaseQuickGO ontologyBLASTP
43072874307973687Putative chormophorylate of CpcAQuickGO ontologyBLASTP
43080284308786759Ethanolamine utilization protein eutJQuickGO ontologyBLASTP
43087704309495726hypothetical proteinBLASTP
43095074309776270Ethanolamine utilization protein eutNQuickGO ontologyBLASTP
43098044310301498hypothetical proteinBLASTP
431030643115261221acetatepropionate kinaseQuickGO ontologyBLASTP
43104264310605180hypothetical protein
43117604312011252hypothetical proteinBLASTP
43121164312901786Putative pduB proteinQuickGO ontologyBLASTP
431296243144791518Ethanolamine utilization protein eutEQuickGO ontologyBLASTP
43145034314802300hypothetical proteinBLASTP
43147774315388612hypothetical proteinBLASTP
431543743179892553hypothetical proteinBLASTP