Pre_GI Gene

Host: NC_005139:1784000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005139:1784000 Vibrio vulnificus YJ016 chromosome I, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17841031784306204hypothetical protein
17843341784954621riboflavin synthase subunit alphaQuickGO ontologyBLASTP
178510917865601452multidrug efflux protein NorAQuickGO ontologyBLASTP
17857621785896135hypothetical protein
17866621787285624hypothetical proteinBLASTP
17872931787874582hypothetical proteinBLASTP
17880151788143129hypothetical protein
17882241788391168transposase and inactivated derivativeQuickGO ontologyBLASTP
178893017911222193hypothetical protein
17914681791770303hypothetical protein
179185117928911041iSSod13 transposaseQuickGO ontologyBLASTP
17931171793236120hypothetical proteinBLASTP
17932841793586303hypothetical protein
17940981794529432hypothetical protein
17944991794669171hypothetical protein
17950961795743648hypothetical protein
17958321796305474hypothetical proteinBLASTP
17964581797210753hypothetical proteinBLASTP
17973641797972609hypothetical proteinBLASTP
17980281798879852transposase and inactivated derivativeQuickGO ontologyBLASTP
17988761799184309transposase and inactivated derivativeQuickGO ontologyBLASTP
17995361799712177hypothetical proteinBLASTP
17998491800220372hypothetical protein
18012161801401186hypothetical proteinBLASTP
18015521802265714hypothetical proteinBLASTP
18024111802926516putative acetyltransferaseQuickGO ontologyBLASTP
18034961803903408NTP pyrophosphohydrolaseQuickGO ontologyBLASTP
18040431804498456histone acetyltransferase HPA2QuickGO ontologyBLASTP
18046431804942300hypothetical protein
180505318064141362hypothetical proteinBLASTP
18064071806997591hypothetical protein
18070271807173147hypothetical protein
18074031807537135hypothetical proteinBLASTP
180767018087911122hypothetical proteinBLASTP
18085451808724180hypothetical protein
18093531809772420hypothetical proteinBLASTP
18108091811552744hypothetical protein
18116951812075381hypothetical proteinBLASTP
18126211812785165hypothetical proteinBLASTP
18137171813947231PAS factorQuickGO ontologyBLASTP
18141421814558417diadenosine tetraphosphate hydrolaseQuickGO ontologyBLASTP
18145761814701126hypothetical proteinBLASTP
181532718176002274hypothetical proteinBLASTP
181771218188571146retron-type reverse transcriptaseQuickGO ontologyBLASTP
18189971819854858probable transmembrane proteinQuickGO ontologyBLASTP
181994318214871545A proteinQuickGO ontologyBLASTP
18214841821735252hypothetical proteinBLASTP
18217281821964237hypothetical proteinBLASTP
18219881822128141hypothetical protein
182223918234471209integraseQuickGO ontologyBLASTP
18235361823694159hypothetical protein
18238101824172363hypothetical proteinBLASTP
18242171824336120hypothetical proteinBLASTP
18244361824621186hypothetical proteinBLASTP
18246421824806165hypothetical proteinBLASTP
182524718270851839hypothetical proteinBLASTP
18272501828173924hypothetical proteinBLASTP
18284521828661210hypothetical protein
18289181829325408NTP pyrophosphohydrolaseQuickGO ontologyBLASTP
18294341830420987hypothetical proteinBLASTP
18304901831341852transposase and inactivated derivativeQuickGO ontologyBLASTP
18313381831646309transposase and inactivated derivativeQuickGO ontologyBLASTP
18319761832128153hypothetical proteinBLASTP
18322961832763468hypothetical proteinBLASTP
18329201833426507putative acetyltransferaseQuickGO ontologyBLASTP
18340691834341273hypothetical proteinBLASTP
18361061836243138hypothetical proteinBLASTP
18362591836438180hypothetical protein
18365291836720192hypothetical proteinBLASTP
18367491837087339hypothetical proteinBLASTP
18372221837701480putative acetyltransferaseQuickGO ontologyBLASTP
18378581838559702hypothetical proteinBLASTP
18389721839097126hypothetical proteinBLASTP
18391351839680546hypothetical protein
18397131839871159hypothetical proteinBLASTP
18398491840364516hypothetical proteinBLASTP
18408581841211354Var1 homologueQuickGO ontologyBLASTP
18413481841821474hypothetical proteinBLASTP
18420231842253231PAS factorQuickGO ontologyBLASTP
18424291842767339hypothetical proteinBLASTP
18424371842568132hypothetical protein
18434631843927465hypothetical protein
18441001844450351hypothetical protein
18445241844697174hypothetical proteinBLASTP
18452131845443231PAS factorQuickGO ontologyBLASTP
18454161845571156hypothetical proteinBLASTP
18464891846608120hypothetical proteinBLASTP
18467081846893186hypothetical proteinBLASTP
18469141847054141hypothetical proteinBLASTP
18470391848010972hypothetical proteinBLASTP
18481521848568417hypothetical proteinBLASTP
18487121849089378hypothetical proteinBLASTP
18492291849831603hypothetical proteinBLASTP
18498051849930126hypothetical protein
18499981850252255hypothetical proteinBLASTP
18504661850825360hypothetical protein
18509991851496498hypothetical proteinBLASTP
18518621851987126hypothetical proteinBLASTP
18525811853105525hypothetical proteinBLASTP
18534211853546126hypothetical proteinBLASTP
18535991853745147hypothetical protein
18544021854917516putative acetyltransferaseQuickGO ontologyBLASTP
18549341855095162hypothetical proteinBLASTP
18550681855397330hypothetical proteinBLASTP
18554531856304852transposase and inactivated derivativeQuickGO ontologyBLASTP
18563011856609309transposase and inactivated derivativeQuickGO ontologyBLASTP
18567201856866147hypothetical proteinBLASTP
18572861857831546hypothetical proteinBLASTP
18578841858225342hypothetical proteinBLASTP
18583761858543168hypothetical proteinBLASTP
18585981858723126hypothetical proteinBLASTP
18590371859345309transposase and inactivated derivativeQuickGO ontologyBLASTP
18593421860193852transposase and inactivated derivativeQuickGO ontologyBLASTP
18602051860423219hypothetical protein
186044718614871041iSSod13 transposaseQuickGO ontologyBLASTP
18620001862362363hypothetical proteinBLASTP
18628271862991165hypothetical proteinBLASTP
18630921863244153hypothetical proteinBLASTP
18634231863785363hypothetical protein
18638921864506615hypothetical proteinBLASTP
18655631865919357hypothetical proteinBLASTP
18663381866463126hypothetical proteinBLASTP
18670931867560468hypothetical proteinBLASTP
18678501868035186hypothetical proteinBLASTP
18681981868317120hypothetical proteinBLASTP
18694071869580174hypothetical proteinBLASTP
18697821870012231PAS factorQuickGO ontologyBLASTP
18701881870751564hypothetical protein
18708611871544684glutathione S-transferaseQuickGO ontologyBLASTP
18716641872314651hypothetical protein
18725591872762204hypothetical protein
18731701873415246hypothetical protein
18737331873918186hypothetical proteinBLASTP
18740631874569507hypothetical proteinBLASTP
187471118758201110hypothetical protein
18763071876474168hypothetical proteinBLASTP
18764471876800354hypothetical proteinBLASTP
18771451877279135hypothetical proteinBLASTP
18774871877729243hypothetical proteinBLASTP
18777361878032297plasmid stabilization system protein ParEQuickGO ontologyBLASTP
18792341880085852transposase and inactivated derivativeQuickGO ontologyBLASTP
18800821880390309transposase and inactivated derivativeQuickGO ontologyBLASTP
18807981880932135hypothetical proteinBLASTP
18815561881873318hypothetical protein
18830581883474417hypothetical proteinBLASTP
18841521884286135hypothetical proteinBLASTP
18842761884773498hypothetical proteinBLASTP
18856771886219543hypothetical protein
18863541886863510hypothetical protein
18873021887520219hypothetical protein
18874381887851414hypothetical proteinBLASTP
18885651889044480putative acetyltransferaseQuickGO ontologyBLASTP
18893801889541162hypothetical proteinBLASTP
18897541889894141hypothetical proteinBLASTP
18901051890299195hypothetical proteinBLASTP
18902811890712432hypothetical proteinBLASTP
18908601891657798hypothetical proteinBLASTP
18918451891970126hypothetical proteinBLASTP
18926531893159507putative acetyltransferaseQuickGO ontologyBLASTP
18934421893594153hypothetical proteinBLASTP
18937741894478705hypothetical proteinBLASTP
18945831895464882hypothetical proteinBLASTP
18956081896150543hypothetical protein
18971621897338177hypothetical proteinBLASTP
18972411897594354hypothetical proteinBLASTP
18977121898176465putative acetyltransferaseQuickGO ontologyBLASTP
18988141899629816hypothetical protein
18996631899794132hypothetical proteinBLASTP
18997671900096330hypothetical proteinBLASTP
19002431900833591hypothetical protein
19008451900985141hypothetical proteinBLASTP
19021781902414237hypothetical proteinBLASTP
19028441903257414hypothetical protein
19034041904201798hypothetical proteinBLASTP
19043451904719375hypothetical proteinBLASTP
19047161904883168hypothetical proteinBLASTP
19048531905317465putative acetyltransferaseQuickGO ontologyBLASTP
19054641905601138hypothetical proteinBLASTP
19055841905727144hypothetical proteinBLASTP
19059381906453516putative acetyltransferaseQuickGO ontologyBLASTP
19066051907033429hypothetical proteinBLASTP
190717819082511074hypothetical proteinBLASTP
19083881908864477putative acetyltransferaseQuickGO ontologyBLASTP
19088301908952123hypothetical proteinBLASTP
19090001909797798hypothetical proteinBLASTP
19098261909951126hypothetical proteinBLASTP
19100111910139129hypothetical protein
19101361910261126hypothetical protein
19104001910810411hypothetical protein
19116791911837159hypothetical proteinBLASTP
19118041912280477putative acetyltransferaseQuickGO ontologyBLASTP
19124261912857432hypothetical proteinBLASTP
191299119140071017transposase and inactivated derivativeQuickGO ontologyBLASTP
191404019154341395putative microtubule binding proteinQuickGO ontologyBLASTP
19160541916617564hypothetical proteinBLASTP
19171561917320165hypothetical proteinBLASTP
191818119192121032hypothetical proteinBLASTP
19192931919445153hypothetical protein
19193571919872516hypothetical protein
19198621919999138hypothetical proteinBLASTP
19199901920433444putative acetyltransferaseQuickGO ontologyBLASTP
19205811921120540adenylate kinaseQuickGO ontologyBLASTP
19212671921830564hypothetical proteinBLASTP
19224351922851417hypothetical proteinBLASTP
19229871923592606hypothetical proteinBLASTP
19236581923837180hypothetical proteinBLASTP
192420719252111005hypothetical protein
19257461925916171hypothetical protein
19264141926635222hypothetical proteinBLASTP
19273631927839477lactoylglutathione lyaseQuickGO ontologyBLASTP