Pre_GI Gene

Host: NC_006361:1547034 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:1547034 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
154703415486321599putative DNA-binding proteinQuickGO ontologyBLASTP
154962715510031377hypothetical proteinBLASTP
15513001551854555putative acetyltransferaseQuickGO ontologyBLASTP
155185115533681518hypothetical proteinBLASTP
15544651555343879putative transposaseQuickGO ontologyBLASTP
155757515603552781hypothetical proteinBLASTP
15605761560746171putative resolvaseQuickGO ontologyBLASTP
156084415618721029hypothetical proteinBLASTP
156242615642431818hypothetical proteinBLASTP
15646311565509879putative transposaseQuickGO ontologyBLASTP
156553615667681233putative sigma factorQuickGO ontologyBLASTP
15667651567139375hypothetical proteinBLASTP
15672991568264966hypothetical proteinBLASTP
15682951568567273hypothetical protein
1568714156897426130S ribosomal protein S20QuickGO ontologyBLASTP
15692711570038768putative transmembrane water channelQuickGO ontologyBLASTP
15700971570717621hypothetical proteinBLASTP
157077515726251851GTP-binding protein LepAQuickGO ontologyBLASTP
157277515749012127hypothetical protein
157496915767591791hypothetical proteinBLASTP