Pre_GI Gene

Host: NC_006361:2920028 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:2920028 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
292002829210681041hypothetical proteinBLASTP
29210852921879795putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
292191729230531137hypothetical proteinBLASTP
29230632923848786putative hydrolaseQuickGO ontologyBLASTP
292407529256191545putative restriction-modification system methyltransferaseQuickGO ontologyBLASTP
292561629268001185putative restriction-modification system specificity determinantQuickGO ontologyBLASTP
29267972927723927putative 5-methyladenine5-methylcytosine- specific restriction endonucleaseQuickGO ontologyBLASTP
292777229290971326hypothetical proteinBLASTP
292935029327933444putative restriction-modification system endonucleaseQuickGO ontologyBLASTP
293312129363513231putative glycosyl hydrolaseQuickGO ontologyBLASTP
293640129374021002hypothetical proteinBLASTP
29375942937980387putative transcriptional regulatorQuickGO ontologyBLASTP
293797729392241248putative transporterQuickGO ontologyBLASTP
29394212939810390putative sigma factorQuickGO ontology