Pre_GI Gene

Host: NC_006361:498305 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:498305 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
497415498308894enoyl-CoA hydrataseQuickGO ontologyBLASTP
4983054998611557acyl-CoA synthaseQuickGO ontologyBLASTP
4999525011421191putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
501139501936798short chain dehydrogenaseQuickGO ontologyBLASTP
502001502237237hypothetical protein
5023695035591191hypothetical proteinBLASTP
503570504076507hypothetical protein
504157504795639putative transcriptional regulatorQuickGO ontologyBLASTP
5048195060091191acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
506142506450309hypothetical protein
506609506824216putative cold shock proteinQuickGO ontologyBLASTP
507019507687669putative hydrolaseQuickGO ontologyBLASTP
507996508202207hypothetical proteinBLASTP
508199509092894putative DNA-binding proteinQuickGO ontologyBLASTP
5095135108501338cytochrome P450 monooxygenaseQuickGO ontologyBLASTP
510868511200333hypothetical protein
511298512179882putative sigma factorQuickGO ontologyBLASTP
5124605136321173putative esteraseQuickGO ontologyBLASTP
513674514114441hypothetical proteinBLASTP
514153514659507hypothetical proteinBLASTP
5147835160901308putative monooxygenaseQuickGO ontologyBLASTP
516162517031870putative DNA-binding proteinQuickGO ontologyBLASTP