Pre_GI Gene

Host: NC_006361:5546232 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:5546232 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
55462325547173942putative carbohydrate kinaseQuickGO ontologyBLASTP
55471705547448279hypothetical proteinBLASTP
55474635547798336hypothetical proteinBLASTP
55478095548090282hypothetical proteinBLASTP
554810355492721170putative phosphate transporterQuickGO ontologyBLASTP
554936755509381572DNA ligaseQuickGO ontologyBLASTP
555107755524831407putative DNA-binding proteinQuickGO ontologyBLASTP
555507855563521275hypothetical proteinBLASTP
55563565557240885putative branched-chain amino acid transporterQuickGO ontologyBLASTP
555723755583791143putative branched-chain amino acid transporterQuickGO ontologyBLASTP
55583765559254879putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
55592385559930693putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
55599375560635699putative transcriptional regulatorQuickGO ontologyBLASTP
556077855621661389hypothetical protein
55623605562905546hypothetical proteinBLASTP
55630065563380375hypothetical proteinBLASTP
55634455563891447hypothetical proteinBLASTP
55638815564585705putative polysaccharide deacetylaseQuickGO ontologyBLASTP
556472755661301404dihydrolipoamide dehydrogenaseQuickGO ontologyBLASTP