Pre_GI Gene

Host: NC_006576:2610565 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006576:2610565 Synechococcus elongatus PCC 6301, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
261056526116231059photosystem II reaction center D2 proteinQuickGO ontologyBLASTP
26120362612443408pterin-4-alpha-carbinolamine dehydrataseQuickGO ontologyBLASTP
261251526142241710probable porinQuickGO ontologyBLASTP
261444926160561608probable porinQuickGO ontologyBLASTP
26162182616673456hypothetical proteinBLASTP
261688826178921005cysteine synthaseQuickGO ontologyBLASTP
26179792618587609hypothetical proteinBLASTP
26187062619365660hypothetical proteinBLASTP
26193622619943582hypothetical proteinBLASTP
26199362620229294hypothetical proteinBLASTP
26202262620483258hypothetical proteinBLASTP
262086326223051443NADH dehydrogenase subunit NQuickGO ontologyBLASTP
26223022622637336hypothetical proteinBLASTP
262305726241781122sodium-dependent bicarbonate transporterQuickGO ontologyBLASTP
26249412625255315hypothetical proteinBLASTP
262536626275612196hypothetical proteinBLASTP
26276392628076438cytochrome CytMQuickGO ontologyBLASTP
2628261262830848cytochrome b6-f complex subunit V PetGQuickGO ontology
26284192628973555hypothetical proteinBLASTP
26289702629623654imidazole glycerol phosphate synthase subunit HisHQuickGO ontologyBLASTP
262983026313951566hypothetical proteinBLASTP
26316742632102429hypothetical proteinBLASTP
263209926336071509UDP-N-acetylmuramoylalanyl-D-glutamate--2 6-diaminopimelate ligaseQuickGO ontologyBLASTP
26336322633898267hypothetical proteinBLASTP
26338892634137249hypothetical proteinBLASTP
2634211263481960930S ribosomal protein S4QuickGO ontologyBLASTP