Pre_GI Gene

Host: NC_006905:3845000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:3845000 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
384518338462081026L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3846218384741411972-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
38476173848549933ADP-L-glycero-D-mannoheptose-6-epimeraseQuickGO ontologyBLASTP
384855238495981047ADP-heptose LPS heptosyltransferase 1QuickGO ontologyBLASTP
38495983850551954heptosyl transferase IQuickGO ontologyBLASTP
385059138518051215hypothetical proteinBLASTP
385186338530081146putative hexose transferase lipopolysaccharide core biosynthesisQuickGO ontologyBLASTP
38531083853917810lipopolysaccharide core biosynthesisQuickGO ontologyBLASTP
38540673854765699lipopolysaccharide core biosynthesis modification of heptose region of the coreQuickGO ontologyBLASTP
385478838557981011UDP-D-glucosegalactosyllipopolysaccharide glucosyltransferaseQuickGO ontologyBLASTP
385581638568291014UDP-D-galactoseglucosyllipopolysaccharide- alpha-13-D-galactosyltransferaseQuickGO ontologyBLASTP
385683538579141080UDP-D-galactoseglucosyllipopolysaccharide-1 6-D-galactosyltransferaseQuickGO ontologyBLASTP
38579843858217234putative inner membrane proteinQuickGO ontologyBLASTP
38582493859046798lipopolysaccharide core biosynthesis phosphorylation of core heptoseQuickGO ontologyBLASTP
385903938601631125glucosyltransferase IQuickGO ontologyBLASTP
386016038612301071lipopolysaccharide core biosynthesis modification of heptose region of coreQuickGO ontologyBLASTP
3861639386291612783-deoxy-D-manno-octulosonic-acid transferaseQuickGO ontologyBLASTP
38629253863404480phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
38634313864240810formamidopyrimidine-DNA glycosylaseQuickGO ontologyBLASTP
3864338386450516850S ribosomal protein L33QuickGO ontologyBLASTP
3864526386476223750S ribosomal protein L28QuickGO ontologyBLASTP
38649803865645666DNA repair protein RadCQuickGO ontologyBLASTP
386581838670411224phosphopantothenoylcysteine synthasedecarboxylaseQuickGO ontologyBLASTP
38670193867477459deoxyuridine 5-triphosphate nucleotidohydrolaseQuickGO ontologyBLASTP
38675853868181597nucleoid occlusion proteinQuickGO ontologyBLASTP
38682593868900642orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
38689793869695717ribonuclease PHQuickGO ontologyBLASTP