Pre_GI Gene

Host: NC_007086:1224867 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007086:1224867 Xanthomonas campestris pv. campestris str. 8004, complete genome

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: The original was isolated from an inflected cauliflower in Sussex, United Kingdom, in 1958. Strain 8004 is a spontaneous rifampicin resistant strain. Causes black rot disease in crucifers. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
122486712267291863sulfur deprivation response regulatorQuickGO ontologyBLASTP
12267961227581786tRNA guanine-N7--methyltransferaseQuickGO ontologyBLASTP
12277261228520795thiazole synthaseQuickGO ontologyBLASTP
12285691228769201hypothetical proteinBLASTP
122895812307421785lipaseesteraseQuickGO ontologyBLASTP
123117012330591890phage-related integraseQuickGO ontologyBLASTP
123369612346971002hypothetical proteinBLASTP
12347681235418651hypothetical proteinBLASTP
12355211235814294hypothetical proteinBLASTP
12358421236726885regulatory protein bphRQuickGO ontologyBLASTP
123747912413993921hypothetical proteinBLASTP
12418241242060237BLASTP
124218712432121026IS1404 transposaseQuickGO ontologyBLASTP
12430261243295270IS1404 transposaseQuickGO ontologyBLASTP
124320012443091110VirB6 proteinQuickGO ontologyBLASTP
12443781244926549hypothetical proteinBLASTP
12453241245854531hypothetical proteinBLASTP
12458511246510660hypothetical proteinBLASTP
12469081247693786BLASTP
12476801248447768ISxcc1 transposaseQuickGO ontologyBLASTP
12485221248788267ISxcc1 transposaseQuickGO ontologyBLASTP
12487881249162375BLASTP
124916312501851023hypothetical proteinBLASTP
125056712515921026hypothetical proteinBLASTP
12521421253068927hypothetical proteinBLASTP
12530611253819759hypothetical proteinBLASTP
125441512559531539hypothetical proteinBLASTP
12559541256301348hypothetical proteinBLASTP
125629812575421245hypothetical proteinBLASTP
12577091258647939hypothetical proteinBLASTP
12587401259018279BLASTP
12596161259771156hypothetical proteinBLASTP
12599481260343396hypothetical proteinBLASTP
12604341260826393virulence regulatorQuickGO ontologyBLASTP
126136512634942130glycogen debranching enzymeQuickGO ontologyBLASTP
12639871264862876ribosomal protein S6 modification proteinQuickGO ontologyBLASTP
12655121266189678two-component system regulatory proteinQuickGO ontologyBLASTP
126635912675161158two-component system sensor proteinQuickGO ontologyBLASTP
12676591268150492hypothetical proteinBLASTP
12681471268437291hypothetical proteinBLASTP
12685121268946435hypothetical proteinBLASTP
126937612707431368IS1478 transposaseQuickGO ontologyBLASTP
12709571271580624dephospho-CoA kinaseQuickGO ontologyBLASTP
12715941272457864type IV pre-pilin leader peptidaseQuickGO ontologyBLASTP
127246412736631200fimbrial assembly proteinQuickGO ontologyBLASTP
12740471274487441pilinQuickGO ontologyBLASTP
12745671275001435pilinQuickGO ontologyBLASTP
127506612767991734pilus biogenesis proteinQuickGO ontologyBLASTP
127721812786211404two-component system regulatory proteinQuickGO ontologyBLASTP
127882112804311611two-component system sensor proteinQuickGO ontologyBLASTP
128066512818341170succinyl-CoA synthetase subunit betaQuickGO ontologyBLASTP
12818591282734876succinyl-CoA synthetase alpha subunitQuickGO ontologyBLASTP