Pre_GI Gene

Host: NC_007348:2519447 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007348:2519447 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
251944725209011455Betaine-aldehyde dehydrogenaseQuickGO ontologyBLASTP
25208982521749852Alphabeta hydrolase foldQuickGO ontologyBLASTP
252177825225607834-oxalocrotonate decarboxylaseQuickGO ontologyBLASTP
252258625233777924-oxalocrotonate decarboxylaseQuickGO ontologyBLASTP
252355825237491924-oxalocrotonate tautomeraseQuickGO ontologyBLASTP
25239112524237327Ethyl tert-butyl ether degradation EthDQuickGO ontologyBLASTP
25246212525511891regulatory protein LysRLysR substrate-bindingQuickGO ontologyBLASTP
25255972525989393Carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
25260532526445393putative outer membrane porin signal peptide proteinQuickGO ontologyBLASTP
252681925279791161Protein of unknown function DUF1275QuickGO ontologyBLASTP
25280292528865837putative spermidine synthase proteinQuickGO ontologyBLASTP
25288792529238360Phosphoryl transfer system HPrQuickGO ontologyBLASTP
25293222529531210Helix-turn-helix protein CopGQuickGO ontologyBLASTP
25298262530278453Pyridoxamine 5-phosphate oxidase-related FMN-bindingQuickGO ontologyBLASTP
25302792530803525putative NADPHquinone reductase and related Zn-dependent oxidoreductaseQuickGO ontologyBLASTP
253118925326611473Permease for cytosinepurines uracil thiamine allantoinQuickGO ontologyBLASTP
25327532533727975Putative agmatinaseQuickGO ontologyBLASTP
25339922534888897regulatory protein LysRLysR substrate-bindingQuickGO ontologyBLASTP
25355392536072534hypothetical proteinBLASTP
25361712536377207BLASTP
25364542536879426Cupin regionQuickGO ontologyBLASTP
25371152537960846SEC-C motifQuickGO ontologyBLASTP
25385982539335738regulatory protein TetRQuickGO ontologyBLASTP
253971025408461137Porin Gram-negative typeQuickGO ontologyBLASTP
25414842542329846Phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
25423652542763399Endoribonuclease L-PSPQuickGO ontologyBLASTP
25427782543608831Phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
254372425451721449General substrate transporterMajor facilitator superfamily MFS_1QuickGO ontologyBLASTP
254520925475152307Molybdopterin oxidoreductaseMolydopterin dinucleotide-binding regionQuickGO ontologyBLASTP
254764925486801032Aminoglycoside phosphotransferaseQuickGO ontologyBLASTP
25487582549522765Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP