Pre_GI Gene

Host: NC_007356:1221500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007356:1221500 Dehalococcoides sp. CBDB1, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12215531222041489transcriptional regulator MarR familyprobableQuickGO ontologyBLASTP
122259912240861488putative reductive dehalogenaseQuickGO ontologyBLASTP
12241141224383270putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
12245191225085567hypothetical proteinBLASTP
12250851225819735hypothetical proteinBLASTP
12261291226410282putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
122645912278411383putative reductive dehalogenaseQuickGO ontologyBLASTP
12279751228127153reductive dehalogenase-homologous N-terminal fragmentQuickGO ontologyBLASTP
12286831228955273putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
122896712304301464putative reductive dehalogenaseQuickGO ontologyBLASTP
123068212322951614sensor histidine kinaseQuickGO ontologyBLASTP
12323011232987687DNA-binding response regulatorQuickGO ontologyBLASTP
12333751233662288putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
123368312352001518putative reductive dehalogenaseQuickGO ontologyBLASTP
123541712365861170sensor histidine kinaseQuickGO ontologyBLASTP
12366001237316717DNA-binding response regulator LuxR familyQuickGO ontologyBLASTP
12375961237865270putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
123788612394121527putative reductive dehalogenaseQuickGO ontologyBLASTP
12395101240151642DNA-binding response regulatorQuickGO ontologyBLASTP
12403291241021693DNA-binding response regulatorQuickGO ontologyBLASTP
12416861242198513transcriptional regulator MarR familyQuickGO ontologyBLASTP
12423311243011681hypothetical proteinBLASTP
12433541244211858radical SAM domain proteinQuickGO ontologyBLASTP
12442081244966759radical SAM domain proteinQuickGO ontologyBLASTP
12449961245568573hypothetical proteinBLASTP
12456861245958273putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
124597612475171542putative reductive dehalogenaseQuickGO ontologyBLASTP
12476701247789120hypothetical protein
12482691248556288putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
124860512500021398putative reductive dehalogenaseQuickGO ontologyBLASTP