Pre_GI Gene

Host: NC_007604:1586243 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007604:1586243 Synechococcus elongatus PCC 7942, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
158624315887592517nitrogen assimilation regulatory proteinQuickGO ontologyBLASTP
15888171589146330conserved hypothetical protein YCF49QuickGO ontologyBLASTP
158920415902231020hypothetical proteinBLASTP
15902831590708426molybdenum-pterin binding domainQuickGO ontologyBLASTP
15907991591614816molybdenum ABC transporter periplasmic molybdate-binding proteinQuickGO ontologyBLASTP
15916111592276666Molybdate ABC transporter permease proteinQuickGO ontologyBLASTP
15922541593093840succinate dehydrogenase iron-sulfur proteinQuickGO ontologyBLASTP
159321515954222208hypothetical proteinBLASTP
15954861595944459possible Rubisco chaperoninQuickGO ontologyBLASTP
15959341596614681probable amidotransferaseQuickGO ontologyBLASTP
15966681596877210hypothetical proteinBLASTP
15969681597366399hypothetical proteinBLASTP
15975161597818303hypothetical proteinBLASTP
15978561598566711hypothetical proteinBLASTP
15986561599168513Flavodoxin long chainQuickGO ontologyBLASTP
159935316003811029iron-stress chlorophyll-binding proteinQuickGO ontologyBLASTP
16006521600777126putative ribonuclease IIQuickGO ontologyBLASTP
16008021601053252panthotenate metabolism flavoproteinQuickGO ontologyBLASTP
16010561601511456plasmid stabilization protein StbB-likeQuickGO ontologyBLASTP
160148916028861398putative ribonuclease IIQuickGO ontologyBLASTP
16030351603415381hypothetical protein
160431916056381320probable amidaseQuickGO ontologyBLASTP
16061291606689561DNA polymerase VQuickGO ontologyBLASTP
160674616080021257DNA-directed DNA polymeraseQuickGO ontologyBLASTP
16080521608816765hypothetical proteinBLASTP
16093731610356984ketol-acid reductoisomeraseQuickGO ontologyBLASTP
16103641611257894Phosphoesterase PHP-likeQuickGO ontologyBLASTP
16112601611853594ATP-dependent Clp protease proteolytic subunit ClpPQuickGO ontologyBLASTP
16119061612748843hypothetical proteinBLASTP
16128701613448579hypothetical proteinBLASTP
16134641614396933principal RNA polymerase sigma factor SigAQuickGO ontologyBLASTP
161520416162711068hypothetical proteinBLASTP
16162841616958675hypothetical proteinBLASTP
16171341617292159hypothetical proteinBLASTP
16181811618687507hypothetical proteinBLASTP
16188001619696897ADP-ribosylglycohydrolase-likeQuickGO ontologyBLASTP
16210961621512417signal transduction inhibitorQuickGO ontologyBLASTP
16219031622220318hypothetical proteinBLASTP
16229701623410441hypothetical proteinBLASTP
162344916256442196Polyphosphate kinaseQuickGO ontologyBLASTP
16257021626019318possible ribosomal protein L36QuickGO ontologyBLASTP
16263571626596240hypothetical proteinBLASTP
16266541627115462hypothetical proteinBLASTP
162720616294492244Heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP