Pre_GI Gene

Host: NC_007794:2839239 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007794:2839239 Novosphingobium aromaticivorans DSM 12444, complete genome

Host Lineage: Novosphingobium aromaticivorans; Novosphingobium; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: This strain, also known as F199, was isolated from a sample obtained at a depth of 410 m from a borehole sample that was drilled at the Savannah River Site in South Carolina, USA. Aromatic hydrocarbon-degrading bacterium. This organism is unusual in that it has glycosphingolipid in the cell envelope instead of the lipopolysaccharide found in most other gram negative organisms. It is typically isolated from a wide range of environmental sites.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
283923928406511413hypothetical proteinBLASTP
284082728427761950Acetate--CoA ligaseQuickGO ontologyBLASTP
28427982843421624two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
284339828467483351multi-sensor hybrid histidine kinaseQuickGO ontologyBLASTP
2847088284716477tRNA-MetQuickGO ontology
284728828474021155S ribosomal RNAQuickGO ontologyBLASTP
28475562850338278323S ribosomal RNAQuickGO ontologyBLASTP
2850668285074376tRNA-AlaQuickGO ontologyBLASTP
2850762285083877tRNA-IleQuickGO ontology
28510102852488147916S ribosomal RNAQuickGO ontologyBLASTP
2852821285289777tRNA-MetQuickGO ontology
285302128531351155S ribosomal RNAQuickGO ontologyBLASTP
28532892856071278323S ribosomal RNAQuickGO ontologyBLASTP
2856401285647676tRNA-AlaQuickGO ontologyBLASTP
2856495285657177tRNA-IleQuickGO ontology
28567432858221147916S ribosomal RNAQuickGO ontologyBLASTP
2858554285863077tRNA-MetQuickGO ontology
285875428588681155S ribosomal RNAQuickGO ontologyBLASTP
28590222861804278323S ribosomal RNAQuickGO ontologyBLASTP
2862134286220976tRNA-AlaQuickGO ontologyBLASTP
2862228286230477tRNA-IleQuickGO ontology
28624762863954147916S ribosomal RNAQuickGO ontologyBLASTP
286455628656081053glycosyl transferase family 2QuickGO ontologyBLASTP
286560528671191515polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
28671732868108936peptidase A2A retrovirus catalyticQuickGO ontologyBLASTP
286816328699891827ABC transporter relatedQuickGO ontologyBLASTP
28700552870255201hypothetical proteinBLASTP
28702642870740477GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
287073728720381302heat shock protein HslVU ATPase subunit HslUQuickGO ontologyBLASTP
2872135287269255820S proteasome A and B subunitsQuickGO ontologyBLASTP
28727382873232495SmpAOmlAQuickGO ontology
28734352873953519hypothetical proteinBLASTP
28739502874465516hypothetical proteinBLASTP
287447028759151446MATE efflux family proteinQuickGO ontologyBLASTP