Pre_GI Gene

Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:1231436 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
123143612339192484DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
123405012367702721Ribosomal protein L17QuickGO ontologyBLASTP
123711712385081392Glycoside hydrolase family 77QuickGO ontologyBLASTP
1238684123945176814-alpha-glucan branching enzymeQuickGO ontologyBLASTP
123971712412431527Glycogen debranching enzyme GlgXQuickGO ontologyBLASTP
124139312425681176Glycogenstarchalpha-glucan phosphorylaseQuickGO ontologyBLASTP
12425791242863285Glucose-1-phosphate adenylyltransferaseQuickGO ontologyBLASTP
124287912442971419NADP transhydrogenase beta subunitQuickGO ontologyBLASTP
12445481244859312Phosphoenolpyruvate carboxykinase ATPQuickGO ontologyBLASTP
12449621245606645Excinuclease ABC A subunitQuickGO ontologyBLASTP
12456271246241615regulatory protein LuxRQuickGO ontologyBLASTP
1246238124653429750S ribosomal protein L23QuickGO ontologyBLASTP
12465481247375828Single-strand binding proteinQuickGO ontologyBLASTP
12474091247684276ribosomal protein S19QuickGO ontologyBLASTP
12477111248043333ribosomal protein L22QuickGO ontologyBLASTP
12480561248730675Beta-hydroxyacyl-acyl-carrier-protein dehydratase FabAQuickGO ontologyBLASTP
12487691249182414UTP--glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
12493901249656267ribosomal protein S17QuickGO ontologyBLASTP
12496941250062369ribosomal protein L14QuickGO ontologyBLASTP
12500961250413318ribosomal protein L24QuickGO ontologyBLASTP
12505201250984465ribosomal protein L5QuickGO ontologyBLASTP
1250998125130330630S ribosomal protein S14QuickGO ontologyBLASTP
1251332125172439330S ribosomal protein S8QuickGO ontologyBLASTP
12517631252296534ribosomal protein L6QuickGO ontologyBLASTP
12523661252716351Ribosomal protein L21QuickGO ontologyBLASTP
12527271253239513Ribosomal protein L27QuickGO ontologyBLASTP
1253281125346618650S ribosomal protein L30QuickGO ontologyBLASTP
12534681253902435Glutamate 5-kinase ProB-relatedQuickGO ontologyBLASTP
125393212552751344SecY proteinQuickGO ontologyBLASTP