Pre_GI Gene

Host: NC_007912:556000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:556000 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
556525556872348hypothetical protein
558089558367279hypothetical protein
558466558705240hypothetical protein
559386559625240hypothetical protein
559787560125339Imidazole glycerol phosphate synthase glutamine amidotransferase subunitQuickGO ontologyBLASTP
560740561090351Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseQuickGO ontologyBLASTP
561243561509267Histidine biosynthesis protein HisFQuickGO ontologyBLASTP
562542562892351hypothetical proteinBLASTP
563034563393360Peptidase S41A C-terminal proteaseQuickGO ontologyBLASTP
563393564025633hypothetical proteinBLASTP
564620564997378Phosphoglycerate mutase 23-bisphosphoglycerate-independentQuickGO ontology
565525565914390Rhodanese-likeQuickGO ontologyBLASTP
566492566920429Glutaredoxin GrxCQuickGO ontologyBLASTP
567053567403351protein export chaperone SecBQuickGO ontologyBLASTP
567612568028417hypothetical protein
5680595691471089putative transcriptional regulator Fis familyQuickGO ontologyBLASTP
569625570350726PASPAC sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
570731571624894510-methylenetetrahydrofolate reductase FADHQuickGO ontologyBLASTP
5717015731041404Glutamine synthetase type IQuickGO ontologyBLASTP
5731605743081149Thiamine biosynthesis proteinQuickGO ontologyBLASTP
5743495753561008transcriptional regulator ArsR familyQuickGO ontologyBLASTP
5756705776732004transketolaseQuickGO ontologyBLASTP
5779475791221176Phosphoglycerate kinaseQuickGO ontologyBLASTP