Pre_GI Gene

Host: NC_007948 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007948:4558000 Polaromonas sp. JS666, complete genome

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
455801345603222310putative prolin-rich exported proteinQuickGO ontologyBLASTP
45610834561580498hypothetical protein
4561988456206376tRNA-GlyQuickGO ontology
456287645641951320AAA ATPase central regionQuickGO ontologyBLASTP
45642494564854606hypothetical proteinBLASTP
456507545666341560hypothetical proteinBLASTP
45666364567181546BLASTP
456752145686601140Saccharopine dehydrogenaseQuickGO ontologyBLASTP
45689454569439495transcriptional regulator AsnC familyQuickGO ontologyBLASTP
456967545707331059Ornithine cyclodeaminaseQuickGO ontologyBLASTP
457088345720431161putative transcriptional regulator Fis familyQuickGO ontologyBLASTP
457224145738211581extracellular solute-binding protein family 5QuickGO ontologyBLASTP
45738224574193372Endoribonuclease L-PSPQuickGO ontologyBLASTP
45743104575308999Oligopeptidedipeptide ABC transporter ATP-binding protein-likeQuickGO ontologyBLASTP
457530545763091005Oligopeptidedipeptide ABC transporter ATP-binding protein-likeQuickGO ontologyBLASTP
45763064577187882binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
45771844578125942binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
457812245795131392BFD-like 2Fe-2S-binding regionQuickGO ontologyBLASTP
45795104579806297putative sarcosine oxidase alpha subunitQuickGO ontologyBLASTP
457978745809141128FAD dependent oxidoreductaseQuickGO ontologyBLASTP
458104745826271581extracellular solute-binding protein family 5QuickGO ontologyBLASTP
458358745847171131FAD dependent oxidoreductaseQuickGO ontologyBLASTP
45847144585007294hypothetical proteinBLASTP
45851704586078909transcriptional regulator LysR familyQuickGO ontologyBLASTP
45861134587039927transcriptional regulator LysR familyQuickGO ontologyBLASTP
458717945892602082transketolaseQuickGO ontologyBLASTP
45893384590300963transaldolaseQuickGO ontologyBLASTP
45903954591306912extracellular solute-binding protein family 3QuickGO ontologyBLASTP
45912914591797507lysine decarboxylase family proteinQuickGO ontologyBLASTP
45917994592620822binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
459264245937211080putative ABC transport system substrate-binding exported proteinQuickGO ontologyBLASTP
459374945947771029ABC transporter relatedQuickGO ontologyBLASTP
45947744595538765binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
45956844596595912transcriptional regulator LysR familyQuickGO ontologyBLASTP
459694545981051161mandelate racemasemuconate lactonizing enzymeQuickGO ontologyBLASTP
459828346000581776binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
460008546011341050extracellular solute-binding protein family 1QuickGO ontologyBLASTP
460116346022511089spermidineputrescine ABC transporter ATP-binding subunitQuickGO ontologyBLASTP
460225146034561206peptidase M24QuickGO ontologyBLASTP
460401146050601050transcriptional regulator LacI familyQuickGO ontologyBLASTP
460532046067351416AmidaseQuickGO ontologyBLASTP
46067774607370594transcriptional regulator XRE familyQuickGO ontologyBLASTP
4607462460866412032-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
46086614609635975NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
46097014610603903transcriptional regulator LysR familyQuickGO ontologyBLASTP
461072846121221395L-serine dehydratase 1QuickGO ontologyBLASTP