Pre_GI Gene

Host: NC_008060 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008060:306170 Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (AU 1054) was isolated from the blood of a patient with CF. This microbe has three chromosomes. Opportunistic pathogen. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
306170307144975tRNA delta2-isopentenylpyrophosphate transferaseQuickGO ontologyBLASTP
3071413091442004DNA mismatch repair protein MutLQuickGO ontologyBLASTP
309276310010735putative DedA family transmembrane proteinQuickGO ontologyBLASTP
311458312270813MscS Mechanosensitive ion channelQuickGO ontologyBLASTP
3124183143461929Capsule polysaccharide biosynthesisQuickGO ontologyBLASTP
3156563168851230polysaccharide export proteinQuickGO ontologyBLASTP
3171173192462130glycosyl transferase family 2QuickGO ontologyBLASTP
3197093211031395hypothetical proteinBLASTP
3211003223141215glycosyl transferase group 1QuickGO ontologyBLASTP
3223323245542223glycosyl transferase group 1QuickGO ontologyBLASTP
324661325317657ABC transporter relatedQuickGO ontologyBLASTP
325314326096783ABC-2 type transporterQuickGO ontologyBLASTP
326342327181840Integrase catalytic regionQuickGO ontologyBLASTP
3273123284601149lipopolysaccharide biosynthesisQuickGO ontologyBLASTP
3297103309151206Capsule polysaccharide biosynthesisQuickGO ontologyBLASTP
330984331694711short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
3317443332341491sulfataseQuickGO ontologyBLASTP
3332383408727635beta-ketoacyl synthaseQuickGO ontologyBLASTP
340869341786918UDP-3-0-acyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP