Pre_GI Gene

Host: NC_008060:2913671 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008060:2913671 Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (AU 1054) was isolated from the blood of a patient with CF. This microbe has three chromosomes. Opportunistic pathogen. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
291192729136781752RHS proteinQuickGO ontologyBLASTP
291367129164752805YD repeatQuickGO ontologyBLASTP
291663629198273192Rhs element Vgr proteinQuickGO ontologyBLASTP
29201842920984801extracellular solute-binding protein family 3QuickGO ontologyBLASTP
29210942921297204hypothetical proteinBLASTP
29223222922966645hypothetical proteinBLASTP
29230302923914885hypothetical proteinBLASTP
292402829256441617phage proteinQuickGO ontologyBLASTP
292702829282901263transposase IS116IS110IS902QuickGO ontologyBLASTP
29288372929562726hypothetical proteinBLASTP
29298022930530729hypothetical proteinBLASTP
29308702931325456hypothetical proteinBLASTP
29315572932468912TrbLVirB6 plasmid conjugal transfer proteinQuickGO ontologyBLASTP
29324792932718240hypothetical proteinBLASTP
29330232933757735hypothetical proteinBLASTP
293438229354251044phage integraseQuickGO ontologyBLASTP
2935523293559876tRNA-ThrQuickGO ontologyBLASTP
29356172936138522Stringent starvation protein BQuickGO ontologyBLASTP
29362102936821612glutathione S-transferase-likeQuickGO ontologyBLASTP
29369162937674759cytochrome c1QuickGO ontologyBLASTP
293769629390781383cytochrome bb6-likeQuickGO ontologyBLASTP
29390782939698621Ubiquinol-cytochrome c reductase iron-sulfur subunitQuickGO ontologyBLASTP
29399172940663747protein of unknown function DUF34QuickGO ontologyBLASTP
294068529418901206peptidase S1 and S6 chymotrypsinHapQuickGO ontologyBLASTP
29420962942884789Sec-independent protein translocase TatCQuickGO ontologyBLASTP
29429262943465540twin-arginine translocation protein TatBQuickGO ontologyBLASTP
29434922943722231twin-arginine translocation protein TatAE familyQuickGO ontologyBLASTP
29438162944181366histidine triad HIT proteinQuickGO ontologyBLASTP
29442132944605393membrane proteinQuickGO ontologyBLASTP
29446762945041366phosphoribosyl-ATP pyrophosphohydrolaseQuickGO ontologyBLASTP
29450382945454417Phosphoribosyl-AMP cyclohydrolaseQuickGO ontologyBLASTP
29454542946227774imidazoleglycerol phosphate synthase cyclase subunitQuickGO ontologyBLASTP
29463342947089756Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseQuickGO ontologyBLASTP