Pre_GI Gene

Host: NC_008146:20047 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:20047 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20047215221476Peptidoglycan glycosyltransferaseQuickGO ontologyBLASTP
21519229311413cell cycle proteinQuickGO ontologyBLASTP
22928244031476protein serinethreonine phosphatasesQuickGO ontologyBLASTP
2440024864465FHA domain containing proteinQuickGO ontologyBLASTP
25008264171410FHA domain containing proteinQuickGO ontologyBLASTP
266552673783tRNA-LeuQuickGO ontologyBLASTP
27053285401488N-6 DNA methylaseQuickGO ontologyBLASTP
28661298961236type I restriction-modification system specificity subunitQuickGO ontologyBLASTP
29896332223327type I site-specific deoxyribonuclease HsdR familyQuickGO ontologyBLASTP
33798356091812hypothetical proteinBLASTP
3589536563669Uracil-DNA glycosylase superfamilyQuickGO ontologyBLASTP
3703737321285hypothetical proteinBLASTP
3765537897243hypothetical proteinBLASTP
3794238268327hypothetical proteinBLASTP
3834038999660hypothetical proteinBLASTP
39866409151050hypothetical proteinBLASTP
40919426971779hypothetical proteinBLASTP
43100441191020aldoketo reductaseQuickGO ontologyBLASTP
4420444809606transcriptional regulator TetR familyQuickGO ontologyBLASTP
4495345942990hypothetical proteinBLASTP
45967469951029Homoserine O-acetyltransferaseQuickGO ontologyBLASTP
47100489711872hypothetical proteinBLASTP
4930249877576transcriptional regulator TetR familyQuickGO ontologyBLASTP
49951509581008NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
50958531742217acyl-CoA dehydrogenase-like proteinQuickGO ontologyBLASTP