Pre_GI Gene

Host: NC_008146:3401743 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:3401743 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
340002234017461725protein of unknown function DUF1446QuickGO ontologyBLASTP
34017433402555813hypothetical proteinBLASTP
34025573403324768Enoyl-CoA hydrataseisomeraseQuickGO ontologyBLASTP
34033683403838471MaoC-like dehydrataseQuickGO ontologyBLASTP
34038353404362528hypothetical proteinBLASTP
34043593404784426MaoC-like dehydrataseQuickGO ontologyBLASTP
34047813405239459MaoC-like dehydrataseQuickGO ontologyBLASTP
340523234062541023luciferase-like proteinQuickGO ontologyBLASTP
34062723406709438protein of unknown function DUF35QuickGO ontologyBLASTP
340670634078721167hypothetical proteinBLASTP
340815334091571005transcriptional regulator AraC familyQuickGO ontologyBLASTP
34092723409592321ferredoxinQuickGO ontologyBLASTP
340962334110111389cytochrome P450QuickGO ontologyBLASTP
341100834122071200FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
34122243412844621transcriptional regulator TetR familyQuickGO ontologyBLASTP
34128963413807912alphabeta hydrolase foldQuickGO ontologyBLASTP
34138073414244438Phenylacetic acid degradation-related proteinQuickGO ontologyBLASTP
34142903414976687transcriptional regulator TetR familyQuickGO ontologyBLASTP
341509734165211425acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
341651834176181101Alcohol dehydrogenase GroES-like proteinQuickGO ontologyBLASTP
34176603418232573Carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
341840334197731371hypothetical proteinBLASTP
342008834212871200Integral membrane protein TerCQuickGO ontologyBLASTP
342129234251073816molybdopterin oxidoreductaseQuickGO ontologyBLASTP