Pre_GI Gene

Host: NC_008148:1567703 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008148:1567703 Rubrobacter xylanophilus DSM 9941, complete genome

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
156770315688031101ABC-2 type transporterQuickGO ontologyBLASTP
15688031569762960ABC transporter relatedQuickGO ontologyBLASTP
15699231570585663two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
157058215718051224periplasmic sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
15722601572511252hypothetical protein
15724921573409918transcriptional regulator LysR familyQuickGO ontologyBLASTP
15736341574389756hypothetical proteinBLASTP
157440515756521248glycine betaineL-proline transport ATP binding subunitQuickGO ontologyBLASTP
15757091576575867binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
15766271577568942Twin-arginine translocation pathway signalQuickGO ontologyBLASTP
157759715787811185Sarcosine oxidaseQuickGO ontologyBLASTP
157880915801191311peptidase M24QuickGO ontologyBLASTP
158023115815351305Rieske 2Fe-2S regionQuickGO ontologyBLASTP
158154415830551512Betaine-aldehyde dehydrogenaseQuickGO ontologyBLASTP
158329015843361047Alcohol dehydrogenase zinc-binding proteinQuickGO ontologyBLASTP
1584674158474673tRNA-HisQuickGO ontology
158476615859771212major facilitator superfamily MFS_1QuickGO ontologyBLASTP
1585997158717211764-hydroxybenzoate 3-monooxygenaseQuickGO ontologyBLASTP
158734915887221374glycine cleavage T protein aminomethyl transferaseQuickGO ontologyBLASTP
15888231589785963Methylenetetrahydrofolate dehydrogenase NADPQuickGO ontologyBLASTP
15897951590376582Formiminotransferase-cyclodeaminaseQuickGO ontologyBLASTP
159037315921031731Formate--tetrahydrofolate ligaseQuickGO ontologyBLASTP