Pre_GI Gene

Host: NC_008148:672608 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008148:672608 Rubrobacter xylanophilus DSM 9941, complete genome

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
672039672614576cobIalamin adenosyltransferaseQuickGO ontologyBLASTP
6726086739601353cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
673957674673717precorrin-2 C20-methyltransferaseQuickGO ontologyBLASTP
674666675439774precorrin-4 C11-methyltransferaseQuickGO ontologyBLASTP
6754326765981167cobalamin biosynthesis protein CbiDQuickGO ontologyBLASTP
6765866777971212Precorrin-6y C515-methyltransferase subunit CbiEQuickGO ontologyBLASTP
6777946794791686precorrin-3B C17-methyltransferaseQuickGO ontologyBLASTP
6794766796822074Fe-4S ferredoxin iron-sulfur binding proteinQuickGO ontology
679679680278600Precorrin-8X methylmutase CbiCCobHQuickGO ontologyBLASTP
680268681161894cobalamin vitamin B12 biosynthesis CbiX proteinQuickGO ontologyBLASTP
6811456822331089Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferaseQuickGO ontologyBLASTP
682230683000771cobalamin 5-phosphate synthaseQuickGO ontologyBLASTP
682997683902906cobalamin biosynthesis protein CobDQuickGO ontologyBLASTP
6839056850051101L-threonine-O-3-phosphate decarboxylase putativeQuickGO ontologyBLASTP
685005685625621Phosphoglycerate mutaseQuickGO ontologyBLASTP
685622686185564cobalbumin biosynthesis enzymeQuickGO ontologyBLASTP
686182686865684iron metal dependent repressor DtxR familyQuickGO ontologyBLASTP
6869836882481266NRAMP family Mn2Fe2 transportersQuickGO ontologyBLASTP
688360689172813zinciron permeaseQuickGO ontologyBLASTP
6893916909711581Chromosome segregation ATPases-like proteinQuickGO ontologyBLASTP
6910656924141350major facilitator superfamily MFS_1QuickGO ontologyBLASTP