Pre_GI Gene

Host: NC_008149:1122693 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008149:1122693 Yersinia pestis Nepal516, complete genome

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
112269311246691977DNA polymerase III subunit Tau contains DNA polymerase III subunit GammaQuickGO ontologyBLASTP
11247251125057333hypothetical proteinBLASTP
11250571125662606recombination protein RecRQuickGO ontologyBLASTP
11256771125835159hypothetical proteinBLASTP
112585411277281875heat shock protein HtpGQuickGO ontologyBLASTP
11279551128599645adenylate kinaseQuickGO ontologyBLASTP
11286891129651963ferrochelataseQuickGO ontologyBLASTP
11302491131238990cdp-6-deoxy-delta-34-glucoseen reductaseQuickGO ontologyBLASTP
11312641132049786glucose-1-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
11320541132197144hypothetical proteinBLASTP
11321901133128939CDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
113314611344591314putative CDP-4-keto-6-deoxy-D-glucose-3-dehydrataseQuickGO ontologyBLASTP
11344961135353858paratose synthaseQuickGO ontologyBLASTP
113535411366371284hypothetical proteinBLASTP
113681611380541239O-unit flippaseQuickGO ontologyBLASTP
11380651138778714hypothetical proteinBLASTP
113915811403001143mannosyltransferaseQuickGO ontologyBLASTP
11405861141518933O-unit polymerase-like proteinQuickGO ontologyBLASTP
114176711427801014mannosyltransferaseQuickGO ontologyBLASTP
11427961143314519hypothetical proteinBLASTP
11432321143918687GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
11439241144889966GDP-fucose synthetaseQuickGO ontologyBLASTP
114507611464821407mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
11464851147228744glycosyltransferaseQuickGO ontologyBLASTP
114723311486061374phosphomannomutaseQuickGO ontologyBLASTP
11487421149353612transposaseQuickGO ontologyBLASTP
11493761149951576transposaseQuickGO ontologyBLASTP
11501521151129978O-antigen chain length determinantQuickGO ontologyBLASTP
115133311526371305inosine-guanosine kinaseQuickGO ontologyBLASTP
115273411544251692potassium antiporterQuickGO ontologyBLASTP
115466011558741215membrane efflux proteinQuickGO ontologyBLASTP
11561561156413258protein UshA precursor UDP-sugar hydrolase UDP-sugar diphosphatase UDP-sugar pyrophosphatase 5-nucleotidase 5-NTQuickGO ontologyBLASTP
115622611571949695-nucleotidase2 3-cyclic phosphodiesteraseQuickGO ontologyBLASTP
11571881157811624hypothetical proteinBLASTP
11579151158154240hypothetical proteinBLASTP