Pre_GI Gene

Host: NC_008253:3122148 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:3122148 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
312214831232301083membrane-bound lytic murein transglycosylase C precursorQuickGO ontologyBLASTP
312343231246881257nucleoside permease NupGQuickGO ontologyBLASTP
312473731268722136ornithine decarboxylase constitutiveQuickGO ontologyBLASTP
31272713127978708putative membrane protein YqgAQuickGO ontologyBLASTP
3128084312815976tRNA-PheQuickGO ontologyBLASTP
312835731296221266putative P4-type integraseQuickGO ontologyBLASTP
31299733130362390hypothetical proteinBLASTP
31307783130969192transposase-like proteinQuickGO ontologyBLASTP
31312393132021783hypothetical protein EAL domainQuickGO ontologyBLASTP
31320743133066993PixG proteinQuickGO ontology
31330893133607519PixF proteinQuickGO ontologyBLASTP
31336913134254564PixJ proteinQuickGO ontologyBLASTP
31342913135163873PixD proteinQuickGO ontologyBLASTP
313509131376612571fimbrial usher protein PixCQuickGO ontologyBLASTP
31377223138309588PixH proteinQuickGO ontologyBLASTP
31383953138928534PixA proteinQuickGO ontologyBLASTP
31396643139888225hypothetical proteinBLASTP
31400413140535495hypothetical proteinBLASTP
314089431421501257hypothetical transport activatorQuickGO ontologyBLASTP
314213131441402010regulatory proteinQuickGO ontologyBLASTP
314413731454081272regulatory proteinQuickGO ontologyBLASTP
314575331471171365transporter proteinQuickGO ontologyBLASTP
31471603147525366hypothetical protein
31475533147759207hypothetical proteinBLASTP
314806531490781014putative cytoplasmic proteinQuickGO ontologyBLASTP
314909031504061317putative L-fucose permeaseQuickGO ontologyBLASTP
31504343151354921putative sugar kinase ribokinase familyQuickGO ontologyBLASTP
31516593152441783putative regulatory protein DeoR familyQuickGO ontologyBLASTP
31525423152658117hypothetical proteinBLASTP
31526693152869201hypothetical protein
31535103153731222hypothetical protein
31538363154369534hypothetical proteinBLASTP
31543633155202840putative transposase orfBQuickGO ontologyBLASTP
31552293155531303probable transposase proteinQuickGO ontologyBLASTP
31556763155873198hypothetical proteinBLASTP
31561203156545426hypothetical proteinBLASTP
31565423156925384hypothetical proteinBLASTP
31569953157216222hypothetical protein
315743131584531023transposase for insertion sequence IS100QuickGO ontologyBLASTP
31584533159232780putative IS100 transposaseQuickGO ontologyBLASTP