Pre_GI Gene

Host: NC_008253:3941938 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:3941938 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
394193839434911554putative transcriptional antiterminatorQuickGO ontologyBLASTP
394378639461042319putative family 31 glucosidase YicIQuickGO ontologyBLASTP
394611439475411428hypothetical membrane protein YicJQuickGO ontologyBLASTP
3947789394787991tRNA-SecQuickGO ontologyBLASTP
394817339493541182putative phage integraseQuickGO ontologyBLASTP
39499653950912948putative type II 5-cytosoine methyltransferaseQuickGO ontologyBLASTP
39509243951841918putative type II 5-cytosoine methyltransferaseQuickGO ontologyBLASTP
395190539531611257hypothetical proteinBLASTP
39536793953927249hypothetical proteinBLASTP
39540693954209141hypothetical protein
39548353955068234hypothetical proteinBLASTP
39550453955698654putative transposaseQuickGO ontologyBLASTP
39558013956583783putative transposaseQuickGO ontologyBLASTP
395658039576021023putative transposaseQuickGO ontologyBLASTP
39576593958183525hypothetical proteinBLASTP
39583813958932552MarR-family transcriptional regulatory proteinQuickGO ontologyBLASTP
39589613959170210hypothetical proteinBLASTP
39594073959619213hypothetical proteinBLASTP
39596623959808147hypothetical protein
39600653960433369hypothetical proteinBLASTP
39604153960690276hypothetical protein
396070939617881080putative F17-like fimbril adhesin subunitQuickGO ontologyBLASTP
396178539643192535putative F17-like fimbrial usherQuickGO ontologyBLASTP
39643273965052726putative F17-like fimbrial chaperoneQuickGO ontologyBLASTP
39651103965661552F17 fimbrial protein precursorQuickGO ontologyBLASTP
39656893965955267hypothetical protein
39662333966655423hypothetical proteinBLASTP
396665839678871230putative FMN-dependent dehydrogenaseQuickGO ontologyBLASTP
39679263968474549hypothetical proteinBLASTP
39684463969285840putative transcription regulator proteinQuickGO ontologyBLASTP
39692693969577309hypothetical proteinBLASTP
39696283969846219hypothetical protein
39700733970210138hypothetical protein
39702543970457204hypothetical protein
39704503970740291putative transposaseQuickGO ontologyBLASTP
397073339724151683hypothetical proteinBLASTP
39726033972884282hypothetical protein
39739723974538567hypothetical proteinBLASTP
39746533975357705hypothetical proteinBLASTP
39754263975659234putative regulatory proteinQuickGO ontologyBLASTP
39756563975814159hypothetical proteinBLASTP
39758903976072183hypothetical proteinBLASTP
39761063976387282hypothetical proteinBLASTP
39764983976962465putative transposaseQuickGO ontologyBLASTP
39771613977388228hypothetical proteinBLASTP
39774113978250840putative transposaseQuickGO ontologyBLASTP
39782773978579303putative transposaseQuickGO ontologyBLASTP
39788473979020174hypothetical protein
39790723979209138hypothetical protein
39796173980447831putative CS12 fimbrial-like upstream regulatory proteinQuickGO ontologyBLASTP
39805763981229654putative CS12 fimbria-like major fimbrial protein subunitQuickGO ontologyBLASTP
39812853981986702CS12 fimbria chaperone FasB-like proteinQuickGO ontologyBLASTP
39819673982398432CS12 fimbria chaperone proteinQuickGO ontology
398247139849782508CS12 fimbria outer membrane usher protein precursorQuickGO ontologyBLASTP
39849663985418453CS12 fimbria chaperone protein precursorQuickGO ontology
39854083985956549CS12 fimbria minor subunit protein precursorQuickGO ontology
398597639872411266FasG-like proteinQuickGO ontology
398747539886711197putative transposaseQuickGO ontologyBLASTP
39887803988956177hypothetical protein
39889973989359363hypothetical proteinBLASTP
39893423989521180hypothetical proteinBLASTP
39896223990458837putative ABC-transporter ATP-binding proteinQuickGO ontologyBLASTP
39903833991309927putative ABC-transporter membrane proteinQuickGO ontologyBLASTP
39913533992231879putative periplasmic binding proteinQuickGO ontologyBLASTP
39924183992630213hypothetical protein
39930463993558513hemolysin-activating lysine-acyltransferase HlyCQuickGO ontologyBLASTP
399357039966443075hemolysin AQuickGO ontologyBLASTP
399671539988382124alpha-hemolysin translocation ATP-binding protein HlyBQuickGO ontologyBLASTP