Pre_GI Gene

Host: NC_008260 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008260:2961291 Alcanivorax borkumensis SK2, complete genome

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
296129129624391149methionine adenosyltransferaseQuickGO ontologyBLASTP
296256129639491389adenosylhomocysteinaseQuickGO ontologyBLASTP
29640202964847828510-methylenetetrahydrofolate reductaseQuickGO ontologyBLASTP
29651812965648468hypothetical proteinBLASTP
296586329673561494pyruvate kinase ATP-pyruvate 2-O-phosphotranferaseQuickGO ontologyBLASTP
296787329690271155hypothetical protein
296936129707311371MATE efflux family protein putativeQuickGO ontologyBLASTP
29707282971021294hypothetical proteinBLASTP
297110729722011095hypothetical proteinBLASTP
29725812972865285hypothetical proteinBLASTP
29732022973951750hypothetical protein
297394829750691122hypothetical proteinBLASTP
29751382976121984Ca2Naantiporter proteinQuickGO ontologyBLASTP
297627429793423069AcrBCD family cationmultidrug efflux pumpQuickGO ontologyBLASTP
297934329804161074Multidrug transporter mdtAQuickGO ontologyBLASTP
29806952981432738peroxiredoxin family proteinglutaredoxin putativeQuickGO ontologyBLASTP
29815722982072501DNA-binding stress proteinQuickGO ontologyBLASTP
29823262983000675membrane protein hemolysin III homolog putativeQuickGO ontologyBLASTP
29830982983415318Transcriptional regulator ArsR family putativeQuickGO ontologyBLASTP
29833542983845492hypothetical proteinBLASTP
29838422984267426hypothetical proteinBLASTP