Pre_GI Gene

Host: NC_008268:7052202 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008268:7052202 Rhodococcus sp. RHA1, complete genome

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
70522027053074873possible hydride transferaseQuickGO ontologyBLASTP
70532857053641357hypothetical proteinBLASTP
705390570551491245possible magnesium chelatase C-terminalQuickGO ontologyBLASTP
70554447055860417Smf proteinQuickGO ontologyBLASTP
705586570576071743possible integraseQuickGO ontologyBLASTP
70588367059144309hypothetical protein
70591377059994858hypothetical protein
70603207060535216hypothetical protein
70605327061029498hypothetical proteinBLASTP
70611797062006828possible phage capsid proteinQuickGO ontologyBLASTP
70621937062447255hypothetical protein
70624667062792327hypothetical protein
70632477063543297hypothetical proteinBLASTP
70635617063953393hypothetical protein
70640247064428405hypothetical proteinBLASTP
70644287064703276hypothetical protein
70647677065090324hypothetical protein
70650877065566480hypothetical protein
70656887066101414hypothetical protein
70661617066598438hypothetical proteinBLASTP
706709170686381548probable propionyl-CoA carboxylase beta subunitQuickGO ontologyBLASTP
70687117069490780hypothetical proteinBLASTP
706950970706781170multidrug resistance transporter MFS superfamilyQuickGO ontologyBLASTP
70707337071005273hypothetical protein
707101170729601950hypothetical protein