Pre_GI Gene

Host: NC_008269:428898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008269:428898 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
428898429644747hypothetical protein
429885430763879hypothetical proteinBLASTP
430792431364573hypothetical proteinBLASTP
431304431732429hypothetical protein
431753432370618hypothetical protein
432503433093591hypothetical protein
433133433426294hypothetical protein
4333954347021308probable acetylornithine deacetylaseQuickGO ontologyBLASTP
4348274364251599AMP-binding enzymeQuickGO ontologyBLASTP
4367934383491557glycine dehydrogenase decarboxylating subunit 2QuickGO ontologyBLASTP
4383394397481410glycine dehydrogenase decarboxylating subunit 1QuickGO ontologyBLASTP
4397854409391155hypothetical proteinBLASTP
441055441861807probable 3-oxoacyl-acyl-carrier protein reductaseQuickGO ontologyBLASTP
441846442442597hypothetical protein
4425734440121440probable amino acid permeaseQuickGO ontologyBLASTP
444054444335282hypothetical protein
444555445487933transcriptional regulator LysR familyQuickGO ontologyBLASTP
445774446289516hypothetical protein
4464514479381488ethanolamine permeaseQuickGO ontologyBLASTP
4479414498781938amine oxidase copper-containingQuickGO ontologyBLASTP
4503274518081482possible amino acid permeaseQuickGO ontologyBLASTP
451805452554750probable transcriptional regulator IclR familyQuickGO ontologyBLASTP