Pre_GI Gene

Host: NC_008278:4023918 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:4023918 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40239184024307390hypothetical proteinBLASTP
40250484025833786putative Trifolitoxin immunity proteinQuickGO ontologyBLASTP
40259374026500564hypothetical proteinBLASTP
40267254027288564hypothetical proteinBLASTP
402729440283791086putative acyltransferaseQuickGO ontologyBLASTP
402868740302911605hypothetical proteinBLASTP
403039840315731176putative Alcohol dehydrogenase zinc-dependentQuickGO ontologyBLASTP
403158240340172436Putative fatty acyl coA reductaseQuickGO ontologyBLASTP
403452140356901170putative 5-3 exonucleaseQuickGO ontologyBLASTP
40358924036335444Putative AsnC-family transcriptional regulator partialQuickGO ontologyBLASTP
403642440376711248putative sugar transport protein ABC superfamily atp_bind N-terminal putative phenotypic repressor of mal operon C-terminalQuickGO ontologyBLASTP
40376824038419738putative sugar transport protein ABC superfamily membraneQuickGO ontologyBLASTP
40386294039516888putative sugar transport protein Sugar ABC transporter permease proteinQuickGO ontologyBLASTP
403952840406791152putative Sugar ABC transporter sugar-binding lipoprotein Maltodextrin-binding proteinQuickGO ontologyBLASTP
40406724040983312hypothetical protein
40409504041171222hypothetical protein
404116840427691602conserved hypothetical protein putative metallo-dependent hydrolase domainQuickGO ontologyBLASTP
404296340448311869Putative polyprenol-phosphate-mannosyl transferaseQuickGO ontologyBLASTP
40448644045694831Putative glycosyl transferase partialQuickGO ontologyBLASTP
40458264046137312conserved hypothetical protein putative copper ion binding domainQuickGO ontologyBLASTP
40462734046698426hypothetical proteinBLASTP
40467704047210441methionine sulfoxide reductaseQuickGO ontologyBLASTP
40476744048198525hypothetical proteinBLASTP
40482994048988690putative SAM-dependent methyltransferaseQuickGO ontologyBLASTP
40489924049162171hypothetical protein
40495914050292702putative kinaseQuickGO ontologyBLASTP
40504684051274807putative methyltransferaseQuickGO ontologyBLASTP
405140740534162010putative DNA polymerase IQuickGO ontologyBLASTP
40536694053998330hypothetical protein putative Peptidase domainQuickGO ontologyBLASTP
40540114055006996putative fatty acid desaturaseQuickGO ontologyBLASTP
405517340578092637putative ATP-dependent helicaseQuickGO ontologyBLASTP
40579044058539636putative two-component system response regulatorQuickGO ontologyBLASTP
405880040603561557conserved hypothetical protein putative reductase and kinase domainsQuickGO ontologyBLASTP
40603104060744435hypothetical protein
40609894061507519hypothetical protein